Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq544 423 2e-113 seq371 143 3e-29 seq183 125 9e-24 seq696 116 5e-21 seq11 116 5e-21 seq77 111 2e-19 seq916 102 1e-16 seq1036 89.7 6e-13 seq302 87.8 2e-12 seq209 87.8 2e-12 seq190 87.8 2e-12 seq213 84.2 3e-11 seq48 84.2 3e-11 >seq544 Length=504442 Score = 423 bits (468), Expect = 2e-113 Identities = 1679/2598 (65%), Gaps = 117/2598 (5%) Strand=Plus/Plus Query 184323 TAGGTACAGCAGACTTTATGATACATCACATACACGCTTTCCAGATTCATGTTTGTGTAT 184382 |||| || ||| | ||| |||| |||||||| || | || ||| ||| | ||||| Sbjct 418640 TAGGAACCGCAAATTTTTTGATCCATCACATTCATGGATTTACGATCCATATGACTGTAT 418699 Query 184383 TAATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTA 184442 | || || || || | |||| ||| || | | || | || |||||| |||| || | Sbjct 418700 TGATACTACTAAAAGATGTTCTATTTGCTTGCAGTTCCCGTTTGATACCA-ATAA-AGCA 418757 Query 184443 AGTTAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAG 184502 | | |||| | || | | |||| ||| | ||||| | || ||||| ||||| | Sbjct 418758 AATCTTGATTTTGTTTTCTT----ATGGACCTAGAAGAGGGAGGACATGTCAAGTATCTG 418813 Query 184503 GATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCT 184562 | ||||||| | ||| | ||| ||||||||||||||||| || || ||||| || | Sbjct 418814 CCTAGGATCATATCTTCTTAGGTCTATTCTGGATGTATAATGCAATTTCGATAGTCATTT 418873 Query 184563 TCCACTTTAGTTGGAGAATGCAA---GATGTATGGGGT-CTAT----------------- 184601 | || || | ||| | ||| || ||||| |||||| |||| Sbjct 418874 TTCATTTCAATTGAAAAATACAGTCGGATGTTTGGGGTACTATAAGTGATCAAGGGGTGG 418933 Query 184602 ------------CAGGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGA 184649 ||||||| || ||||| ||||||| ||||| || ||| ||| | Sbjct 418934 TAACTCATATCACAGGAGGAAATTTTGCACAGAGTTTCATTACTATTAATTAGTGGCTCC 418993 Query 184650 GAGACTTCTTATGGTCACAGTCAAGTCAAGTTCT-CAATAGTTATGGACAAGACATCAGC 184708 |||| || ||||| ||| | || |||||| | |||| |||||| ||| | | Sbjct 418994 GAGATTTTTTATGAGCACGGGCATCTCAAGTAATTCAATC-TTATGGTTTTT-CATTATC 419051 Query 184709 A-TGTATGGTTTGCTATTTCTT-GGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCC 184766 | |||||| || |||||| || || |||||| | || || || | ||| ||||| | Sbjct 419052 CGTATATGGT---CTTTTTCTTAGGTGCCCATTTTATTTGAGCTTTTAATTTAATGTTTC 419108 Query 184767 TATGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACA 184826 ||| ||||| || || |||||||| | || || ||||| | |||||| ||||||| Sbjct 419109 TATTCAGTGGCCATGGTTATTGGCAAGAACTCATTGAATCTATCGTTTGGGCTCATAACA 419168 Query 184827 AATTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTG 184886 |||||||| |||| | | | | | | | ||||| || ||| ||||| |||||||| Sbjct 419169 AATTAAAA-TTGCTCTTGCTACTTAGTCTAGAGCCTTGAGCATTGTACAAGTACGTGCTG 419227 Query 184887 TTGGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTC 184946 | | ||| | || | ||| || | || |||||||||| || | |||||||||| || Sbjct 419228 TAGAAGTAACCCATTACTTTCTGGATGGAATTGCCACAATATAGACATTCTTCTTAGCAA 419287 Query 184947 ACCTTATCCCCTTAAGTTAAATCATGGCTACTA-------AAA--CAAAATTTCC--AAA 184995 |||| | || | ||| |||||| | ||| || || | || Sbjct 419288 GAATTATTGCAGTAGGATAA----TGGCTAGAAGGATTTGAAAGGCATTATGGCATTAAG 419343 Query 184996 ATTTAATCAAGATTTGGC--------AAGT---GATCCTACAACTAGGAGATTGTGGTAT 185044 |||| || || ||| || || | ||||| | ||| | || |||| Sbjct 419344 ATTT--TCGAGGTTTAGCCTCGGCTAAACTCAGGATCCCATTACTCATCGTTT-TGGTTG 419400 Query 185045 GGATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTTATAT 185104 | ||| || || ||||||||||| ||||||||||| |||| || || || | | ||| Sbjct 419401 GTATT-GCCACCGCACATGACTTCGAGAGTCATGATGATATTACTGAGGAACATCTTTAT 419459 Query 185105 CAAAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGT 185164 || || | |||||| | || ||||| || | ||||| |||||| | | | | | Sbjct 419460 CAGAATATTTTTGCTTCTCATTTTGGGCAGTTAGCAATAATCTTTTTGTAGACATCCGAA 419519 Query 185165 AATTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACAT 185224 ||| | ||||| |||| ||||||| || |||| | || ||||| |||| Sbjct 419520 AATCTGTTTCATGTAGCTTGGCAAGAAAA--TTGAGTCATGGATACAGGACCCCTTACAT 419577 Query 185225 GTGATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCA 185284 || | |||||| || || ||| |||||||||||||||| |||| || ||| || Sbjct 419578 GTAAGACCTATTGCTTATGCAATTTGGGATCCTCATTTTGATCAACCAGCTGTAGAAGCC 419637 Query 185285 TACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGG 185344 | || | | ||| ||| || ||||| | |||| | | ||||| ||| Sbjct 419638 TTTACTCGAGGGGGTGCTATCAACCCAGTGAATATCGCTTATTTCGATATTTATCAGTGG 419697 Query 185345 TGGTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATTTATGATT 185404 ||||| | | | | || | || ||| | | || ||||| || | | ||| || | Sbjct 419698 TGGTAAAAATCAGAT-TGCGTACCAATGAGGATCTTTATACAGGAGCTCTTTTTCTGTTA 419756 Query 185405 CTACTAGCATTGGTAT---CTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCA 185461 | || | || ||| ||||| | | | ||||||| |||| || | | Sbjct 419757 TTTCTTTC--TGCTATATCCTTTATAGCGGGTTGG--TACATCTACAACCCAAATGAAAA 419812 Query 185462 CCTAAGCTTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTA 185521 | | || | ||||| ||| ||| || | | ||||||||| | |||| || Sbjct 419813 TCAAGTATTTCGTGGTTCAAA-ATATCGAATCTCGTCTCAATCATCATTTGTCAGGACTT 419871 Query 185522 TTTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCA 185581 |||||| | |||||| | || ||||| | ||||| | || | || || || ||| Sbjct 419872 TTTGGAGTAAGTTCT-TGGCTTGGGCAAGACATTTAGTTCATATCGCTATTCCCAGATCC 419930 Query 185582 AGAGGA-ATCACTGTAGATTGGACTAATTATGTGTTTATGAA--ACCTCATCCTGCAGGT 185638 || | | | || || | |||| ||||| | | | | | || |||||| ||| Sbjct 419931 AGGGAAGAGTAC-GTCAAATGGAATAATTCT---TAAACGTATTACTGCATCCTCAAGGG 419986 Query 185639 TTACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGATTAAAT 185698 || ||| | ||||| || | | | | ||||||| || || ||||| | | | Sbjct 419987 TTGGGACCACTTTTTACGGGTCAATTGACTCTTTATGCTCATAACTCTGATTCAAGTAGT 420046 Query 185699 CAAATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACA-TTCATGGGTGGTTT 185757 | |||| ||| | | || | | ||| || || |||| ||| |||| | || Sbjct 420047 CCTTTATTTGGTACTTCCCAAGGAGCCGAAACTGCCATTCTAACCCTTCTTGGGAGATT- 420105 Query 185758 CCATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGG 185817 ||||| |||| | |||||||||| ||||| || |||||||| | || || Sbjct 420106 CCATCTGCAAATGCAAAATTTATGGTTGATCGATATTGCTCATCATCATTTAGCTATTAC 420165 Query 185818 AGTAATATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGTCACTCAAT 185877 | | || ||| | ||||| ||||||||||||||| | | ||||| || || Sbjct 420166 ATTTATTTTC-TCATTGCTAGTCATATGTATAGAACTAACTTCAAAATTGGACATAGTAT 420224 Query 185878 GAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGG 185937 || || | | ||| ||||||| || ||| | || || |||| || ||||||| Sbjct 420225 CAAAGATCTTTTAGAAACACATACTCCTCCAGGGGGTCGATTAGGATGTGGGCATAAAGA 420284 Query 185938 ATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCT 185997 | ||||| ||| | | | || | | | || |||| | ||| || | | | | Sbjct 420285 TCTTTATGACACAATCAATAATTCGATTTATTT-CAATTAGACCGTGCTCTAACCTGTTT 420343 Query 185998 AGGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCAT 186057 ||| ||| ||||| | || || ||||| || ||||| | || | ||| | ||||| Sbjct 420344 AGGGGTTATTACTTCCTTAGTAGCTCAACACATATACTCTTTACCTACTTATCCATTCAT 420403 Query 186058 AGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCAACTGC 186117 |||||| | |||||| ||||||| ||||| |||||| |||||||| | | | Sbjct 420404 AGCACAAGACTTTACTACTCAAGCTGTCTTATATACTCATCACCAATACATCGTAGA-GT 420462 Query 186118 TC-TGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTA 186176 || | ||| || | ||||| |||||||| ||||| || ||||| | | | || | Sbjct 420463 TCATCATGACAGGAGTCTTTGCTCATGGAGCTATATTCTTCATTAGAAATTATAATTCGG 420522 Query 186177 CTCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTC 186236 |||| |||| ||||| | || |||||| || | ||||| ||||| || | | || Sbjct 420523 AATAGAATGAGGATAATGTATTAGAAAGAATGTTAGACCACAA-GAAGCTATCAAATCTC 420581 Query 186237 ACTTAAGTTGGGTATCACTAT--TCCTTGGATTCCATACTTTAGGAATCTATGTCCATAA 186294 | ||||||||| | || | | | || || ||||||||||| || | ||||| ||||| Sbjct 420582 ATTTAAGTTGG--ACCAGTTTGTTTCTCGGGTTCCATACTTTGGGCCTTTATGTTCATAA 420639 Query 186295 TGATGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGC 186354 | || | | | |||||| | | | | | | || || || ||||| ||||||| Sbjct 420640 CAACGTCATGCTCACTTTTGGTACTTCAAAAA-ATAAATCTTGATCGAACCCTTATTTGC 420698 Query 186355 ACAGTGGATACAGGCAGCATCA-GGTAAGATGATGTATGGATTAAGTTTCTTACTATCTG 186413 || |||||||| | || ||| ||||||| ||||| || | || | ||||| Sbjct 420699 CCAATGGATACAATCCGC-TCATGGTAAGACTTCATATGGGTTCGATGTCCTCTTATCTT 420757 Query 186414 ATCCAAATAGTGCTGCAAGTCTA-GCAGCAGAGAGTATGCCTGGTAATCATTACTGGATG 186472 ||||| || | ||| || | || | | || || |||| | | | ||||| || Sbjct 420758 CAACAAATGGTCCAGCAT-TCAATGCTGGTCAAAGCATA--TGGTTACC-TGACTGGTTG 420813 Query 186473 AGTGCTATGAATGATCAA-ACAAACAGTCTGTTTCTACCAATAGGACCTGCTGATTTATT 186531 | | || | ||||| || | || || || || |||||| | || ||||| || Sbjct 420814 AATACTGTTAATGAGAAATAGTAATTCGCTCTTCTTAACAATAGATCTTGAAGATTTCTT 420873 Query 186532 AGTTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTGC 186591 ||||||||||||||||| || || || |||||||||| || || |||| || ||||| Sbjct 420874 GGTTCATCATGCTATTGCTCTAGGTTTGCATACTACAATATTGATTTTAGTAAAAGGTGC 420933 Query 186592 ATTAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCCC 186651 |||||||| | ||||| ||| | || | |||||| || ||||| || ||| || | Sbjct 420934 TTTAGATGCACGTGGTTCTAAATTAATGCTAGATAAAAAGGATTTCGGTTATAGTTTTTC 420993 Query 186652 TTGTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATCT 186711 ||| || || | | | | |||||||||| ||||| ||| | |||||||| || ||| | Sbjct 420994 TTGCGACGGCCTAAGACGCGGTGGTACTTATGATATTTCAGCTTGGGATGTATTTTATTT 421053 Query 186712 CTCTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAAGAA 186771 | || |||| | || ||||| || | ||| | |||||||||||| ||||| | Sbjct 421054 GACAGTTTTCTAGATGTTAAATACCATTGGATGTGTTATTTTTTATTGGCATTGGAAACA 421113 Query 186772 CCTTGCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTATGGG 186831 | | | | ||| |||||| ||||||| ||| ||| || ||| | ||||| Sbjct 421114 CATCACATTATAGCAGGGTAATGTTTCACAATTTAATGAATCTTCCACTTATTTGATGGG 421173 Query 186832 TTGGTTCAGAGATTATCT 186849 ||||| ||||||||||| Sbjct 421174 ATGGTTAAGAGATTATCT 421191 Score = 190 bits (210), Expect = 3e-43 Identities = 428/628 (68%), Gaps = 34/628 (5%) Strand=Plus/Plus Query 183632 CTTTGGATGACAGATATAGCACATCATCACCTAGCAATAGCAGTTATGTTT--ATCATTG 183689 || ||| ||| ||||| ||||| ||||| |||| || || || | ||| ||||||| Sbjct 417921 CTATGGCTGAGCGATATTGCACACCATCATTTAGCTATTGCTATTCTTTTTTGATCATTG 417980 Query 183690 CAGGTCATATGTATCGCACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTAGATG 183749 ||||||||||| | || |||| ||| || ||||| | ||||| || ||| | | Sbjct 417981 ---GTCATATGTATAGGACCAACTAGGGCATCGGTCATGGCCTTAAAGACATTTTAAAGG 418037 Query 183750 GTCAGAATGGTTTCCC---ACAGG---GTGTCACACACAGAGGATTATATGAATTTCTAG 183803 ||| || ||| || ||||| | | || | || || |||||||| | ||| Sbjct 418038 CTCATAAAGGT--CCATTTACAGGCCAGGGCCATA---AG-GGCCTATATGAAATCCTAA 418091 Query 183804 CAGAATCAAGACATGCACAACTATCACTGAATCTGGCAATGCTAGGATCTATCAGTATCA 183863 || |||| | ||||| ||| |||| || | || || |||||||| | | | | || Sbjct 418092 CAACATCATGGCATGCTCAATTATCTCTAGACCTAGCTATGCTAGGTTTTTTAACCATTG 418151 Query 183864 TAGTTTCACATCATATGTATGCAATGCCACCTTATCCATATCTTGGTATTGAATATCCAA 183923 | || | | ||||||||| | ||||| || |||||||| || | |||||| ||| | Sbjct 418152 TTGTAGCTTACCATATGTATTCCATGCCCCCCTATCCATACCTAGCTATTGATTATGGTA 418211 Query 183924 CAGTAGTAGGATTATTCACCCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCAT 183983 || | | || ||||| ||||| |||||||| ||||| ||||| || || |||| Sbjct 418212 CATAACTTTTGTTGTTCACACATCACATGTGGATCGGTGGATTTCTCATAGTTGGTGTTG 418271 Query 183984 CAGCACATGCTTCAATTGCTATGATAAGAGACTATAATCC---TGTTCAACATATGGGAA 184040 | |||||| | ||| |||| |||||| |||| |||| | |||| | | | Sbjct 418272 CTATACATGCAACCATTT-TATGGTAAGAGGCTATGATCCAACTACTCAATACAATG--- 418327 Query 184041 ATGTATTAGATAGAATACTTA---AATCTAGAGATGCAATCATCAGTCACTTGAACTGGG 184097 || ||||||| | | |||| | || ||||||||||| || | ||||||| Sbjct 418328 ATCTATTAGACCGTGTCCTTAGGCACCCT---GATGCAATCATATCACATCTTAACTGGG 418384 Query 184098 TATGCATCTTTTTAGGTTTTCATAGTTTTGGTCTTTATATTCACAATGATATTATGAGAG 184157 ||| || |||||| |||||| | |||||| | |||||||| ||||||| ||||| | Sbjct 418385 CATGTAT-ATTTTAGATTTTCACAATTTTGGCTTGTATATTCATAATGATACCATGAGCG 418443 Query 184158 CATT-GGGTAGACCTAATGATCTATTCAGTGATACAGCAATACAATTACAACCTGTATTT 184216 | || || | | || || ||| | || ||||| || ||||||| |||||| | ||| Sbjct 418444 CTTTAGGATGGTCCCAA-GATATGTTTTCAGATACTGCTATACAATGACAACCCATCTTT 418502 Query 184217 GCACAGTCTGTTCAGAGATTACATGCTT 184244 | || | || || | ||| ||||||| Sbjct 418503 TCTCAATGGGTACAAACATT-CATGCTT 418529 Score = 163 bits (180), Expect = 4e-35 Identities = 366/539 (68%), Gaps = 18/539 (3%) Strand=Plus/Plus Query 182847 TAGCAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGATT 182906 |||| || || ||| | || | ||| || || ||||| |||| || |||||||| ||| Sbjct 417178 TAGCTAAGGGCCCTGATACTATCACTTGAATTTGGAACCTACATGCTGATGCTCACAATT 417237 Query 182907 TTGATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTG 182966 | |||| ||| |||||||| || | |||| ||| | | ||||| | |||| |||| Sbjct 417238 TCGATAGTCATACTAGTGATTTGGAGGAGATCTCACAACATGTATTTAGTCCACATTTTG 417297 Query 182967 CTCATCTAGGTATCATCTTTGTATGGATGAGCAGTTTCTTCTTTCAAGG-TGCTAGGTTT 183025 ||| | || |||||| | ||| |||| | | | ||| || || | | | ||| Sbjct 417298 GTCAACCCTCCATTATCTTTCTTTGGTTGAGTGGCATATACTTCCATGGCTCCCATTTTT 417357 Query 183026 TCAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGGTT 183085 |||| ||| || |||| | || || |||||| | |||| |||| ||||| ||| Sbjct 417358 TCAAT-TATGAAGTATGGCTAAGTGATCCTACTCATATTGGACCTAGTGCCCAAGTAGTT 417416 Query 183086 TGGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGTGCAGGATATCAAGGTATT 183145 ||||| ||| | |||||||| ||||||||||| ||| | | ||||| ||| || Sbjct 417417 TGGCCAATAGTAGGTCAAGAAATATTGAATGGTGAT--GTGGGCAGG-------GGTTTT 417467 Query 183146 --AGAATTAC-ATCTGGT-TTA-TTTCAGATGTGGAGAGCATGGGGTATAACAAATGAAA 183200 |||| ||| | || | ||| |||||||| ||| ||||| || ||||| | |||| Sbjct 417468 CGAGAAATACGACCTCCTATTATTTTCAGATTTGGCAAGCATCTGGAATAACTAGTGAAT 417527 Query 183201 CTCAACT-AATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGTTATGTTTAATGCT 183259 || || || | | | || | | ||| || || | ||| || | ||| || ||| Sbjct 417528 TACAGCTCTATTGTACCA-CAATTGATGCATTGGTCTTTGCATCATTAATGCTTGTTGCC 417586 Query 183260 GGTGCATTTCATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCAGAATGTAGAATCT 183319 ||| || |||| |||| ||||| || || || ||||| || |||||| |||| Sbjct 417587 GGTTGGTTCCATTATCACAAAGCTGCCCCAAAATTGGATTGGTTCCAAGATGTAGGATCT 417646 Query 183320 ATGATGAATCATCACCTTGCAGGTTTGCTTGGTCTTGGTTCTTTAGGATGGGCAGGACA 183378 ||| ||||| | ||| | || || || || || ||||| ||| | ||||| ||||| Sbjct 417647 ATGTTGAATTACCACTTAGCGGGGTTACTAGGACTTGGGTCTCTCTCTTGGGCGGGACA 417705 >seq371 Length=681730 Score = 143 bits (158), Expect = 3e-29 Identities = 239/341 (70%), Gaps = 7/341 (2%) Strand=Plus/Plus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||| | || |||||||| |||||||||| | || | |||||| | | || | Sbjct 471273 ACCTATAACTATTCAGTATTCTTATGAAAA-TCGATCACATCAGAGCATTTCTGTGGTTG 471331 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 || |||| ||| |||||||||||||||||||||||||||||||| | || || || || Sbjct 471332 AATCCACTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGTGTATGCCCGAT 471391 Query 188757 TAATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAACTTAGAAA 188816 || |||| | || ||||| | | | | | | | || || || || | || Sbjct 471392 AGATCTACCCATTGTAGATTGAAAATTTGAAAGAGATATTA--AAAAAATAATTGCTTAA 471449 Query 188817 TTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCAAC 188876 |||| ||||| ||||| | | || |||||||| |||||||| || || |||||||| Sbjct 471450 TTATAGTATTGATTTTGGGGTCTATATATTCTGTGGTAATTGTGTCGAGTATTGTCCAAC 471509 Query 188877 TAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCAACTCAA 188936 |||| | ||| ||||| ||||| |||||||| || ||||||| | ||| || | || Sbjct 471510 AAACTATTTATTAATGACTGAAGAATATGAACTTTCCATTTTTGATCGTCATGAATTGAA 471569 Query 188937 CTATGATAATGTAGCTCTTGGTAGATTACCTACCAATGTCA 188977 ||| || | | ||| ||| ||| | || |||||||| Sbjct 471570 TTATAATCAGATTGCT-TTG---GATCAATTATCAATGTCA 471606 >seq183 Length=1044213 Score = 125 bits (138), Expect = 9e-24 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 182560 ATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCTTCCTCACCTAGAAC 182619 ||| |||||| | |||||||| || || ||||| ||||||||||||||| |||| ||||| Sbjct 429756 ATTGGAAATGATACCTTGGGACGGATGTAAAGCTAAGCAAATTGCTTCCGCACCAAGAAC 429697 Query 182620 TGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACAGACTTTTTAAGTA 182678 || || |||||||| ||||||||||||||| | || || || ||||| ||||| |||| Sbjct 429696 CGAAGACTGTGTAGGTTGTAAGAGATGTGAATCCGCCTGCCCAACAGATTTTTTGAGTA 429638 >seq696 Length=409996 Score = 116 bits (128), Expect = 5e-21 Identities = 156/216 (72%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 185054 ACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTTATATCAAAAATTA 185113 |||||||||||| |||||||| |||| ||||||| || || | | ||||| || | Sbjct 145755 ACTGCACATGACATTGAGAGTTATGATGATATGACTGAGGAACATCTGTATCAGAACATT 145814 Query 185114 TTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAATTTAATT 185173 |||||| | || ||||| || || ||||| |||||||||||| | | | ||| | || Sbjct 145815 TTTGCTTCTCATTTTGGGCAGCTAGCAATAATCTTTCTATGGATGTCTAGAAATCTGTTT 145874 Query 185174 CATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACATGTGATACCT 185233 |||| ||| | ||||| || ||||| | || ||||| |||||| | |||| Sbjct 145875 CATAAAGCTGGACAAGG-AATTTTGAGTCATCGATAAAGGACCCTTTACATGTAAGACCT 145933 Query 185234 ATAGCACATAGAATATGGGATCCTCATTTTGGTCAA 185269 || || | | ||| | |||| |||||||||||||| Sbjct 145934 ATTGCTCTTGCAATTTAGGATGCTCATTTTGGTCAA 145969 >seq11 Length=2925444 Score = 116 bits (128), Expect = 5e-21 Identities = 255/369 (69%), Gaps = 25/369 (7%) Strand=Plus/Plus Query 184595 GGTCTATCAG-GAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGA 184653 ||| ||||| || | |||||||| || ||||| ||||| |||||||||||| | ||| Sbjct 1937447 GGTATATCACCGAAGGAACTTTGCACAAAGTTCCATTACTATCAATGGATGGCTCCAAGA 1937506 Query 184654 CTTCTTATGGTCACAGTCAAGTCA---AGTTC--TCA-ATAGTTATGGACAAGACATCAG 184707 || |||||| | ||| || ||| | ||| ||| ||||| | || | || | Sbjct 1937507 TTTTTTATGGACGCAGGCATCTCAGATAATTCAATCATATAGTCCTT--CATTATAT--G 1937562 Query 184708 CATGTATGGTTTGCTATTTCTTG-GAGCACATTTTGTATGGGCATTCAGTTTGATGTTCC 184766 ||| ||||| | | |||||| | || ||| | | || ||||| ||||| | Sbjct 1937563 CAT--ATGGTCT--TTTTTCTTATGTGCTCATCCAGATT-----TTTAGTTTAATGTTTC 1937613 Query 184767 TATGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACA 184826 ||| || | | | || |||||||| | || | || || || ||| ||||| | Sbjct 1937614 TATTTAGCAGCCGTAGTTATTGGCAAGAACTCATTAAATCCATCATTTCGGCTCATAATA 1937673 Query 184827 AATTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTG 184886 |||||||| ||| ||| | | |||||| | ||| || ||| |||||||||||||| Sbjct 1937674 AATTAAAAGTTGTTCCTGCTACTCAACCTAAAGCCTTGAGCATTGTACAAGGACGTGCTG 1937733 Query 184887 TTGGAGTTGCACACT-TCTTACTTGGA-GGTATTGCCACAACATGGGCATTCTTCTTTGC 184944 | ||||| | || | |||| || || || ||||||||||||||| |||||||||| || Sbjct 1937734 TAGGAGTAACCCATTATCTT--TTAGATGGAATTGCCACAACATGGACATTCTTCTTAGC 1937791 Query 184945 TCACCTTAT 184953 || |||| Sbjct 1937792 ACAAATTAT 1937800 >seq77 Length=1732857 Score = 111 bits (122), Expect = 2e-19 Identities = 193/277 (70%), Gaps = 8/277 (3%) Strand=Plus/Minus Query 183935 TTATTCACCCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCT 183994 || ||||| ||||| |||||||| ||||| ||||| || || ||||| | |||||||| Sbjct 393615 TTGTTCACGCATCACATGTGGATCGGTGGATTTCTCATAGTTGGTGCTGCTGCACATGCA 393556 Query 183995 TCAATTGCTATGATAAGAGACTATAATCC---TGTTCAACATATGGGAAATGTATTAGAT 184051 ||| | |||| ||||||||| ||| | || | ||| | || ||| |||| Sbjct 393555 GTCATTTTTGTGATTAGAGACTATGGTCCAACTACTCGATATAATG---ATCTATCAGAT 393499 Query 184052 AGAATACTTAAAT-CTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTT 184110 | | |||| ||| ||||||||||| || | |||| || ||| || ||| | Sbjct 393498 CGTGTCCTTAGGCACTAC-GATGCAATCATATCACATCTTAACTAGGCATGTATATTTCT 393440 Query 184111 AGGTTTTCATAGTTTTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACC 184170 || |||||| |||||||| | |||||||| ||||||| ||||| || || || | || Sbjct 393439 AGATTTTCACAGTTTTGGCTTGTATATTCATAATGATACCATGAGCGCTTTAGGGTGGCC 393380 Query 184171 TAATGATCTATTCAGTGATACAGCAATACAATTACAA 184207 ||||| | || |||| | ||| |||||||| Sbjct 393379 CCATGATTTGTTTTCAGATATCGTTATATAATTACAA 393343 >seq916 Length=298367 Score = 102 bits (112), Expect = 1e-16 Identities = 212/313 (68%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 191090 TTTGTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATT 191149 ||||| || || || ||||| || | || | ||| || | |||||| | || ||| | Sbjct 270202 TTTGTTGCTCTCCACGGTGTTTTCAGACTAACAGGTTTTACATTACGTTAATTCGAACCT 270261 Query 191150 GCAGGATTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTT 191209 || |||| ||| | ||| ||| ||||| | || || | || | || || || Sbjct 270262 GCTTGATTTGTGCAATTGTGACTTTATAATGCAATCGCATTCTTTGTTCCAATTGCTATT 270321 Query 191210 TTCACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCA 191269 || ||||||||| || |||||||| ||||| ||||||||||||||||| || Sbjct 270322 TTGTTTC-TGTATTCTTCATTTATCCACTGGGTCAATCTAGTTGGTTCTTTGCACC--CA 270378 Query 191270 TTTGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACA 191329 || |||||||| || ||| ||| || || ||| | ||||| || || ||| | Sbjct 270379 ---GGTGTTGCAGCTATATTTTGATTCATCCTCTTCTTCCAAGGGTTTCATAATTGGATG 270435 Query 191330 CTCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCC 191389 | ||||| || || ||| |||||||| || | ||||| || | ||||| | Sbjct 270436 TTGAACCCATTTCATTTGACTGGAGTTGCCGGAGTATTAGGTACTGCTCTGCTATGCACT 270495 Query 191390 ATTCATGGTGCTA 191402 ||||||||||||| Sbjct 270496 ATTCATGGTGCTA 270508 >seq1036 Length=293819 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 184737 ATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGGTAGAGGATACTGGCAAGAGT 184796 ||||| | ||||| |||||||| ||||| ||| | ||| | || || ||| |||| Sbjct 79483 ATTTTATTTGGGCTTTCAGTTTAATGTTTTTATTCAATGGCCGTGGTTATTGGTAAGAAC 79424 Query 184797 TGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACTTGCACCTACCATTCAACCAA 184856 | || || || || | ||||| ||||||||||||||| |||| ||| | | ||| || | Sbjct 79423 TCATTGAATCCATCGTTTGGGTTCATAACAAATTAAAAGTTGCTCCTGCTACTCAGCCTA 79364 Query 184857 GAGCAATGTCAATTACACA 184875 |||| ||| |||||||| Sbjct 79363 GAGCTTTGTGCATTACACA 79345 >seq302 Length=820434 Score = 87.8 bits (96), Expect = 2e-12 Identities = 94/121 (78%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 184091 AACTGGGTATGCATCTTTTTAGGTTTTCATAGTTTTGGTCTTTATATTCACAATGATATT 184150 ||||||| ||| || ||| |||||||||||| |||||| | |||||||| ||||||| Sbjct 601067 AACTGGGCATGTATATTTCTAGGTTTTCATAATTTTGGCTTGTATATTCATAATGATACC 601126 Query 184151 ATGAGAGCATT-GGGTAGACCTAAT-GATCTATTCAGTGATACAGCAATACAATTACAAC 184208 ||||| || || |||| | | ||| || | |||| ||||| | ||||||||||||| Sbjct 601127 ATGAGTGCTTTAGGGTGGCCTCAATATATGTTTTCA--GATACCACTATACAATTACAAC 601184 Query 184209 C 184209 | Sbjct 601185 C 601185 >seq209 Length=1023485 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/173 (72%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 184772 AGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTA 184831 ||||| | || || |||||||| | || | || || | | ||| ||| |||||||| Sbjct 502540 AGTGGCTGTGGTTATTGGCAAGAACTCATCAAATCCATCGTTAGGGT-CATGACAAATTA 502598 Query 184832 AAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGA 184891 ||| |||| || || | |||||| ||||| || ||| | |||||| |||||| ||| Sbjct 502599 AAAGTTGCTCCCACTACTCAACCTAGAGCCTTGAGCATTGTATAAGGACATGCTGTAGGA 502658 Query 184892 GTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGC 184944 || | || | | | ||||| || ||||| |||| ||||||||| | || || Sbjct 502659 GTAACCCATTACCTTCTTGGTGGAATTGCTACAATGTGGGCATTCCTATTAGC 502711 >seq190 Length=981008 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 184337 TTTATGATACATCACATACACGCTTTCCAGATTCATGTTTGTGTATTAATTCTTCTCAAG 184396 ||| |||| ||||| || || | || ||| ||||| | |||| || || || || Sbjct 54452 TTTTTGATCCATCATATTCATGTATTTATGATCCATGTGACTATATTGATACTACTGAAA 54511 Query 184397 GGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTAAGTTAGGATTCAGA 184456 || |||||| || | | || | || ||||| ||||| || || || ||| | Sbjct 54512 TGTATTTTATTTACTCGTAGTTCTCTTTTGATACCTGATAA-AGCAAATTTTAATTTTGT 54570 Query 184457 TTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGGATGGGATCATGTA 184516 || ||||||||||| |||| ||||| | || || || ||||| | ||||||||| Sbjct 54571 TTTCCTTGTGATGGATCTGGAAGAGGGGAAACATGCCAAGTATCCACCTAGGATCATGTC 54630 Query 184517 TTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTTCCACTTTAGTT 184574 ||| | ||||||| || ||||| ||| || | | |||| || ||| | ||||||| Sbjct 54631 TTCTTAAGTTTATTTTGCATGTACAATACAATTTTTGTAGTCATTTTCTATTTTAGTT 54688 >seq213 Length=870275 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/138 (74%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 186887 CCATTTGGTATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTT 186946 || ||||||||||||| | | | |||||||||| |||||| || ||||| ||| | ||| Sbjct 213639 CCTTTTGGTATGAATAGTTTATTGGTATGGGCATAGATGTTTTTATTTGGACATCTTGTT 213698 Query 186947 TGGGCAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGAG 187006 | ||| | |||||||||||| | ||||| || | | ||||| | || || || || Sbjct 213699 TAGGCTATTGGATTTATGTTCTTAATTTC-TGACGTAGATATTGATAGGAATTGATAGAA 213757 Query 187007 ACTCTTGCTTGGGCACAT 187024 ||| | || || || ||| Sbjct 213758 ACTTTAGCATGAGCTCAT 213775 >seq48 Length=1779855 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 187055 TGGAGAGATAAACCAGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACAT 187114 ||||||||||| |||||||| ||||| ||||| ||||||||| | ||||| ||| || Sbjct 1557153 TGGAGAGATAAGCCAGTGGCTCTTTCCATTGTGCAAGCAAGATTGGTTGGATTAGTCCAC 1557094 Query 187115 TTTGCCATAGGATTTGTGCTTACCTATGCACCATTCCTGATAGC 187158 ||| ||||||| | | | | || |||||| | ||| |||| || Sbjct 1557093 TTTTCCATAGGTTATATATTCACTTATGCAGCTTTCTTGATTGC 1557050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631216019172960