Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 9e-15 >seq4 Length=3455462 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || || |||||||| || || |||| ||||| ||| | Sbjct 2201270 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACCATCACTCTTGAGGTCGAGAGCTCG 2201211 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| |||| || || ||||| ||||| ||||| |||| ||| | Sbjct 2201210 GACACGATTGACAAC--GTGAAGGCTAAAATTCAGGACAAGGAAGGCATTCCTCCGGACC 2201153 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || || || ||||| ||||| ||| |||| || | |||| | || | ||||| | Sbjct 2201152 AGCAGCGTTTGATCTTTGCTGGAAAGCAACTGGAGGATGGCCGCACCCTGGCGGATTATA 2201093 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||||| ||| ||| | || ||||| | || | ||||| ||| Sbjct 2201092 ACATCCAAAAGGAGTCTACTCTTCACTTGGTGCTCCGCCTCCGTGGTGGC 2201043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355746357274812