Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq782 86.0 5e-12 >seq782 Length=366579 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101024 CTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA 101083 ||||| |||| ||||| ||||| ||||||||||| |||||||| |||| ||| | | Sbjct 138083 CTTAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTGTAATCAGCCAAGGTTCGGCCA 138024 Query 101084 TCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTG 101143 |||||||| ||||| || || | || | |||||||| ||| ||| | || || ||| Sbjct 138023 TCTTCCAACTGTTTTCCAGCGAAAATCAATCTTTGTTGATCTGGGGGTATACCCTCCTTG 137964 Query 101144 TC 101145 || Sbjct 137963 TC 137962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409527214221804