Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2239 118 1e-21 seq1503 116 4e-21 seq5201 113 5e-20 seq825 107 2e-18 seq12074 105 8e-18 seq948 98.7 1e-15 seq20732 84.2 2e-11 seq2085 84.2 2e-11 seq7691 82.4 9e-11 >seq2239 Length=36943 Score = 118 bits (130), Expect = 1e-21 Identities = 152/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || |||| || || |||| || ||||||||||| ||||| Sbjct 31450 CTCCTTCTGAATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTACCGGCGAA 31509 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | ||||||||| ||| || |||| | Sbjct 31510 GATGAGCCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 31569 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| |||||||| || | |||||||| ||||| || || || || || Sbjct 31570 GTCGATGGTGTCGGAGGATTCCACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTTTTCAC 31629 Query 43172 AAAGATTTGCATTTTTACGCCGAATACAA 43200 ||||| ||||| | ||| ||| |||| Sbjct 31630 GAAGATCTGCATCTGAACG--GAACACAA 31656 >seq1503 Length=43560 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| || | ||| |||||| || || || || || || ||||| || |||| || Sbjct 30456 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGCGAGAGTGCGGCCGTCCTC 30515 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | ||| | || |||||||||| Sbjct 30516 CAGCTGCTTCCCTGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 30575 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | |||||| ||| ||||| || | ||||| || | Sbjct 30576 GATCTTCGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCCACCTCAAGGGTGATCGTCT 30634 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| | |||||| || ||||| ||||| Sbjct 30635 TCCCCGTCAACGTCTTCACGAAGATCTGCAT 30665 >seq5201 Length=23257 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||||||||| ||||| || |||| || |||||||| || ||||| Sbjct 10872 CTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 10931 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||| | ||| | | |||||||||| ||| || ||| | ||| Sbjct 10932 GATGAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTAGCTTTCA-CGT 10990 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | || ||||| || ||||| || |||| Sbjct 10991 TGTCTATGGTGTCCGAGCTC---TCCACCTCCAAGGTAATGGTCTTCCCCGTGAGGGTCT 11047 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 11048 TCACGAAGATCTGCAT 11063 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 11100 CTCTTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 11159 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | |||||||||| || | || ||| |||||| ||| || ||||| ||| Sbjct 11160 GATGAGCCTTTGCTGGTCGGGAGGGATGCCCTCTTTGTCCTGGATCTTAGCTTTGA-CGT 11218 Query 43112 CGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| |||| ||||||||||| || || ||||||| Sbjct 11219 TGTCGATGGTGTCCGAGCTC---TCCACCTCGAGGGTGATGGTTTTTCCAGTGAGCGTCT 11275 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 11276 TAACAAAGATCTGCAT 11291 >seq825 Length=54200 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 43197 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 43256 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | ||| | || |||||| ||| ||| | || | | ||| Sbjct 43257 GATAAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCC-TGAATCTTGGCCTTCACGT 43315 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| ||||| |||| ||||| || || ||||| || ||||| | Sbjct 43316 TGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTCCCCGTGAGAGTCTTCA 43375 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 43376 CGAAGATCTGCATCTT 43391 >seq12074 Length=11460 Score = 105 bits (116), Expect = 8e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||||||||||| || || | || || |||||||| || || || Sbjct 3193 CTCCTTCTGGATGTTGTAATCAGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 3134 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||||| || | || |||||| ||| ||| || |||| | Sbjct 3133 GATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTAGCCTTGACATT 3074 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| ||| ||||| |||| |||||||| ||||| || | ||||| Sbjct 3073 GTCAATGGTGTCAGAACTC---TCCACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTT 3017 Query 43169 TACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 3016 GACAAAGATTTGCAT 3002 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| |||||||| ||||| || || | || || |||||||| || || || Sbjct 3420 TCCTTCTGAATGTTGTAATCTGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAG 3361 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 ||||| | ||||||||| | || | | |||||||||| ||| | || | |||| | Sbjct 3360 ATGAGCCTCTGCTGGTCCGGGGGGATACCCTCCTTGTCC-TGAATCTTGGCCTTGACATT 3302 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | |||||||| || || || | ||||| Sbjct 3301 GTCGATGGTGTCCGAGCTC---TCCACCTCAAGGGTGATGGTCTTCCCAGTCAAAGTCTT 3245 Query 43169 TACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 3244 GACGAAGATTTGCAT 3230 >seq948 Length=51001 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || ||||| || || || || || |||| || |||||||| || || || Sbjct 18912 CTCTTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCAAGCTGCTTCCCGGCAAA 18853 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 |||||| ||||||||||| | ||| | | ||||||||| ||| || |||| ||| Sbjct 18852 TATGAGGCGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTCGCCTTGA-CGT 18794 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| |||| ||||| || || || || || ||||| | Sbjct 18793 TGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCCCGGTGAGGGTCTTCA 18734 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 18733 CGAAGATCTGCATCTT 18718 >seq20732 Length=5382 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| || ||||| || || | || || || ||||| ||||| || Sbjct 5003 CTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAA 4944 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| | ||||| || | || | | |||||| ||| ||| | || | ||||| Sbjct 4943 GATGAGCCTTTGCTGATCCGGGGGTATTCCCTCCTTATCC-TGAATCTTGGCTTTGACAT 4885 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||||| || || | ||||| || || || || || || || | Sbjct 4884 TGTCAATTGTGTCAGAGGATTCAACCTCAAGGGTGATCGTCTTTCCAGTGAGAGTTTTGA 4825 Query 43171 CAAAGATTTGCAT 43183 ||||||||||||| Sbjct 4824 CAAAGATTTGCAT 4812 >seq2085 Length=38219 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60053 TATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||| || || |||| || || ||| ||||||||| |||| |||||||||||||||| Sbjct 27904 TATAAATAAATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGA 27845 Query 60113 ATACTCACCACTATACTAC 60131 ||||||||||||||||||| Sbjct 27844 ATACTCACCACTATACTAC 27826 >seq7691 Length=17496 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | | || |||||| || | || ||||| || || || || || ||| Sbjct 17184 CCTCCCCTGAGCCTCAGCACCAAGTGGAGGGTAGATTCCTTCTGGATGTTATAGTCGGCC 17243 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || | |||||| ||||| || ||||| | ||| ||||| | || Sbjct 17244 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGAGGG 17303 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTC---GCTCGATTC 43132 | || |||||||||| || ||| || | ||| | | | ||||| |||| || Sbjct 17304 ATGCCCTCCTTGTCCTGTATCTTTGCCTTCA-CGTTGTCTATGGTGTCCGAGCTC---TC 17359 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| |||||||| || || || || || || |||||||||||||| Sbjct 17360 AACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATTTGCAT 17410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571490627548600