Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq553 100 6e-16 seq1774 89.7 1e-12 >seq553 Length=61157 Score = 100 bits (110), Expect = 6e-16 Identities = 303/459 (66%), Gaps = 18/459 (4%) Strand=Plus/Plus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 |||||| | || || ||||| || ||||||||||| ||||| ||||| || | ||||| Sbjct 7710 GTACTCACCGACCCTTTTCTCGAAGAAGTTGGTCTTCCCCTGCAGAGAGATGAGTTCCAT 7769 Query 157318 CCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTA 157377 ||| ||||||||||||| | ||||| |||| ||| |||||| ||| | Sbjct 7770 CCAGTCGAATGGGTTGGAGACCCCGTACATCTTGCGGTAGCCCAGCGCCCCGAGCAGGCG 7829 Query 157378 GTCCGCCACAAACTTGATGTACTCTGTCAT----GCTCTTCTCGCTGATACCGATGAGCG 157433 ||| |||||||||| |||||||| |||| || | | | || |||| ||||| Sbjct 7830 GTCGGCCACAAACTCGATGTACTGGCTCATCAGGGCAC----CATTCATCCCGACGAGCG 7885 Query 157434 CGACGGGAAGCGCCGACG-AAATGAATTCGCACTCAACGCTAACAGCGTGCTTGAAAATT 157492 ||||||| || | || || | | ||| || | ||| | ||| |||| | || Sbjct 7886 CGACGGGCAG-GGCGTCGCAGACGAACTCCCGCTCGATATCAACGGCGTCGGCAACGATA 7944 Query 157493 TCATGAACTCTCTCCCGCGGCAGCCTATTCTTGAGATGCTTGTAGATGAGAACGGAAGCC 157552 | | || | ||| | ||| | || ||| | ||| | ||| || | Sbjct 7945 GCCCGGACCTTGTCCTCAGAGAGCTTGTTGCGGAGGAGGCCGTAAAGGAGGCAGGCA-AA 8003 Query 157553 GTGGC-GTGAAGTCCTTCGTCTCTGGCGATGAGAGAGTTCGCGAACGACAAACC---CTT 157608 || || |||||| || ||||| | || |||||| ||| | ||| | | ||| | | Sbjct 8004 GTCGCAGTGAAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCAT 8063 Query 157609 GAACTTCTGCCGCTTCTTCAGCCAGTAGATGGCGCAGAACGACCCACTGAACTGCACGCC 157668 || | | |||||||| |||||| ||||||||||||| || || ||| | ||| Sbjct 8064 GA--GGCCG-CGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAAAATATGCC 8120 Query 157669 CTCCAGACAGGTGAAGCCGACTAGCCTCTCCGCGAGTGA 157707 ||| | |||| |||| |||| || | ||| |||| ||| Sbjct 8121 CTCGAAGCAGGCGAAGGCGACGAGTCGCTCGGCGAATGA 8159 >seq1774 Length=40918 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || || |||| |||| || ||||| || |||| ||||||||| | ||| || Sbjct 29894 GACTTTGACTATGATTATTTTGGATTTAAAACTCTTGAGAGGTCGTATCTCTTAAAAGTT 29835 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 ||||||| | ||||| | || |||||||||||| |||| ||||| || || ||| Sbjct 29834 TGTGGCAAGGTAGTGGAGAGGCCACAACACATGTTGATGAGAGTAGCTGTTGGAATCCAC 29775 Query 248929 AAGGATGACATAGA 248942 || |||||||| || Sbjct 29774 AAAGATGACATTGA 29761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073137057124160