Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23]
45,745 sequences; 451,284,018 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq2079 96.9 3e-15
seq20732 93.3 3e-14
seq10 93.3 3e-14
seq12074 86.0 5e-12
>seq2079
Length=38309
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||||| || || || |||| ||||| || ||||| ||||| ||||| ||||| ||
Sbjct 8429 TCCTCCCCTGAGCCTGAGCACCAAATGAAGCGTAGATTCCTTTTGGATGTTATAGTCTGC 8370
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| || || ||| |||||||| || || ||| |||| | |||||||| || |||
Sbjct 8369 CAAGGTGCGACCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTTTGTTGGTCTGGGGG 8310
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| ||| ||||| || ||| | | |||| || | ||| |||||| | |||
Sbjct 8309 GATGCCCTCCTTGTCTTGAATCT-TAGCTTTTACATTATCAATGGTGTCAGAAGATTCGA 8251
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
|| | ||||||| | || ||||| | || || | ||||||||||||
Sbjct 8250 CCTCTAGGGTGATGGTCTTACCGGTGAGGGTCTTAATGAAAATTTGCATT 8201
>seq20732
Length=5382
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || ||||| |||||||||||||||| || | |||
Sbjct 5023 AGCACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 4964
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | ||| ||||| ||| |||| || ||||| |||||| ||| | || ||||||||
Sbjct 4963 TCAAGTTGCTTGCCAGCAAAGATGAGCCTTTGCTGATCCGGGGGTATTCCCTCCTTATCC 4904
Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||| | | || ||||| | ||| |||||| || || |||| |||||| |
Sbjct 4903 TGAATCT-TGGCTTTGACATTGTCAATTGTGTCAGAGGATTCAACCTCAAGGGTGATCGT 4845
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || || | ||||| ||||| ||||||||
Sbjct 4844 CTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 4812
>seq10
Length=144934
Score = 93.3 bits (102), Expect = 3e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| ||||| ||||| ||||||| ||||| || ||||| || || ||| ||| |||||
Sbjct 69410 TCCCCCCCGGAGTCTCAGTACCAAATGAAGGGTAGATTCCTTCTGGATGGAGTAATCGGC 69469
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| || | |||||||||||| ||||| ||| |||| || ||||| || ||||| ||
Sbjct 69470 TAAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCCACAGG 69529
Query 18218 CACGCCTTCCTTATCG 18233
| || ||||| |||
Sbjct 69530 GATACCCTCCTTGTCG 69545
>seq12074
Length=11460
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||||| ||||| || || | |||||| || ||||| || ||||||||||| || |||
Sbjct 3456 CCTCCCCTAAGTCTCAGCACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 3397
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | ||| || | || ||||| ||| |||| || || || || ||| |||
Sbjct 3396 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 3337
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| || ||||| || ||| | |||||| | | | ||||| | |||
Sbjct 3336 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCCGAGCTCTCCACC 3277
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| ||||||| | || || ||||| || || || || ||||||||
Sbjct 3276 TCAAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAGATTTGCAT 3230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379132509200025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |