Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2079 96.9 3e-15 seq20732 93.3 3e-14 seq10 93.3 3e-14 seq12074 86.0 5e-12 >seq2079 Length=38309 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || || || |||| ||||| || ||||| ||||| ||||| ||||| || Sbjct 8429 TCCTCCCCTGAGCCTGAGCACCAAATGAAGCGTAGATTCCTTTTGGATGTTATAGTCTGC 8370 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || || ||| |||||||| || || ||| |||| | |||||||| || ||| Sbjct 8369 CAAGGTGCGACCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTTTGTTGGTCTGGGGG 8310 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||| ||||| || ||| | | |||| || | ||| |||||| | ||| Sbjct 8309 GATGCCCTCCTTGTCTTGAATCT-TAGCTTTTACATTATCAATGGTGTCAGAAGATTCGA 8251 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||||||| | || ||||| | || || | |||||||||||| Sbjct 8250 CCTCTAGGGTGATGGTCTTACCGGTGAGGGTCTTAATGAAAATTTGCATT 8201 >seq20732 Length=5382 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || || | ||| || || || || ||||| |||||||||||||||| || | ||| Sbjct 5023 AGCACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 4964 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | ||| ||||| ||| |||| || ||||| |||||| ||| | || |||||||| Sbjct 4963 TCAAGTTGCTTGCCAGCAAAGATGAGCCTTTGCTGATCCGGGGGTATTCCCTCCTTATCC 4904 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||| | | || ||||| | ||| |||||| || || |||| |||||| | Sbjct 4903 TGAATCT-TGGCTTTGACATTGTCAATTGTGTCAGAGGATTCAACCTCAAGGGTGATCGT 4845 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || | ||||| ||||| |||||||| Sbjct 4844 CTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 4812 >seq10 Length=144934 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| ||||| ||||| ||||||| ||||| || ||||| || || ||| ||| ||||| Sbjct 69410 TCCCCCCCGGAGTCTCAGTACCAAATGAAGGGTAGATTCCTTCTGGATGGAGTAATCGGC 69469 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||||||||| ||||| ||| |||| || ||||| || ||||| || Sbjct 69470 TAAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCCACAGG 69529 Query 18218 CACGCCTTCCTTATCG 18233 | || ||||| ||| Sbjct 69530 GATACCCTCCTTGTCG 69545 >seq12074 Length=11460 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| ||||| || || | |||||| || ||||| || ||||||||||| || ||| Sbjct 3456 CCTCCCCTAAGTCTCAGCACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 3397 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | || ||||| ||| |||| || || || || ||| ||| Sbjct 3396 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 3337 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || ||||| || ||| | |||||| | | | ||||| | ||| Sbjct 3336 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCCGAGCTCTCCACC 3277 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| | || || ||||| || || || || |||||||| Sbjct 3276 TCAAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAGATTTGCAT 3230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379132509200025