Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4041 145 7e-30 seq24876 104 2e-17 seq1503 104 2e-17 seq948 95.1 1e-14 seq2239 89.7 5e-13 seq2079 89.7 5e-13 seq825 89.7 5e-13 >seq4041 Length=27173 Score = 145 bits (160), Expect = 7e-30 Identities = 391/595 (66%), Gaps = 5/595 (1%) Strand=Plus/Plus Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 || ||||||||||| ||||| || || || |||||| ||| | | || | Sbjct 307 GCCTTTTTCGCCGCTTCCGACGGCATCGTCCTCGAGAACCTGGCGGGCCGGTTCATGCGC 366 Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 || || || | | ||||| | ||| ||||| || || | ||||| || ||| | Sbjct 367 GACGTCCAGCTTCCTGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 426 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT 57875 || || || |||||||| || ||| |||| || ||| | |||||| ||||||||| Sbjct 427 CACTCTGAGATGTATTCTCTCCTCCTCGACACCTACATCAAGGACCCCGACGAGAAGTCC 486 Query 57876 AGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATC 57935 | || ||| || ||||| || || || | ||||| ||||| |||||| | | Sbjct 487 CGCCTCTTCCGTGCCATCGACACCATCCCTCCTGTCGCCCGCAAGGCCGAGTGGGCGCTA 546 Query 57936 AAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995 ||||| || || | | | ||||||||||| | || | || |||||| |||| Sbjct 547 CGCTGGATCGAAT---CCTCTGGCTCGTTCGCCGAGCGCCTCGTTGCTTTCGCCTGCGTC 603 Query 57996 GAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCT 58054 || || || ||||| || ||| ||| ||| || || || ||| | ||||| |||||||| Sbjct 604 GAGGGAATCTTCTTCTCCGGCTCCTTCTGC-GCCATCTTCTGGCTCAAGAAGCGCGGCCT 662 Query 58055 GATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGA 58114 ||||| || || || || |||||| | || || || |||||||| ||||| || Sbjct 663 CATGCCGGGTCTCACCTTCTCAAACGAGCTCATCTCCCGTGACGAGGGCCTCCACTGCGA 722 Query 58115 TTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGA 58174 || || ||||| | ||| | || ||| || | | | | || || ||| Sbjct 723 CTTCGCCTGCCTTCTCTACAACCTTCTTCGCAACAAGCTCTCCGAGTACCGTGTCCGGGA 782 Query 58175 CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGC 58234 || | |||| || || | |||||| || || ||| ||| ||||| ||||| || Sbjct 783 AATCGTTGCCGATGCCGTTGACATCGAACGGGAATTCGTCTGCGATGCCCTGCCGGTCGC 842 Query 58235 CATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289 | | |||| ||||| || | ||| |||| || ||||| || |||||| Sbjct 843 CCTTGTCGGGATGAATGGCGACCTCATGAGTCAGTATATCGAGTTCGTGGCCGAC 897 >seq24876 Length=3860 Score = 104 bits (114), Expect = 2e-17 Identities = 234/347 (67%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 57782 CTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCAT 57841 ||| ||||| || || | ||||| || ||| | ||||| || ||||| || || ||| | Sbjct 1597 CTTCTACGGCTTCCAGATCGCCATCGAGAACATCCATTCTGAGATGTACTCCCTCCTCCT 1538 Query 57842 CGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAAT 57901 ||| || ||||| ||| || ||||||||| | | || ||| || | ||||| || || Sbjct 1537 CGACACCTACGTCAAGTACCCCGACGAGAAGTTTCGCCTCTTCCACACCATCGATACCAT 1478 Query 57902 GCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCAC 57961 ||||| ||| ||||| || ||| | | ||||| | || | | | | Sbjct 1477 CCCCGCCGTCGTTCGAAAGGCCGACTGGCCCCTTCGCTGGATCGATT---CCTCTGGCTC 1421 Query 57962 GTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT 58021 ||||||||| || | || ||||| | || || || ||||| | | | ||| Sbjct 1420 CTTCGCCGAGCACCTTGTTGCCTTCGCTTGCATCAGGGGCATCTTCTTCACCGACTCCTT 1361 Query 58022 -TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACG 58080 |||| | || || ||| | |||||||| ||||| ||||||||||| || || |||| Sbjct 1360 CTGCG-CTATCTTCTGGCTCAAGAAACGTGGCCTCATGCCCGGCCTCACCTTCTCCAACA 1302 Query 58081 AGTTGA-TATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 | || | | | |||||||||| ||||| ||| || || ||||| Sbjct 1301 AATTCATTCTTCTGCGACGAGGGCCTCCACTGTGACTTCGCCTGCCT 1255 >seq1503 Length=43560 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || ||||||||| | || || || |||| Sbjct 30665 ATGCAGATCTTCGTGAAGACGTTGACGGGGAAGACGATCACCCTTGAGGTGGAGTCGTCG 30606 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| ||| | ||||| |||||| Sbjct 30605 GACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 30546 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || ||| |||| ||| ||| | ||| |||||| Sbjct 30545 CAGCGCCTCATCTTCGCAGGGAAGCAGCTGGAGGACGGCCGCACTCTCGCCGACTATAAC 30486 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || || ||||| || Sbjct 30485 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 30454 >seq948 Length=51001 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| || || || || || |||||| |||| || || | Sbjct 18718 AAGATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACTATCACCCTCGAGGTGGAGTCT 18777 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| || || |||||||||||| | ||||| ||| Sbjct 18778 TCGGACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAAGGGATCCCGCCGGAC 18837 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || ||||| || || || ||| | || ||| || | ||| || Sbjct 18838 CAGCAGCGCCTCATATTTGCCGGGAAGCAGCTTGAGGACGGCCGCACCCTCGCCGACTAC 18897 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| || ||||| || || || || Sbjct 18898 AACATCCAGAAAGAGTCCACTCTCCACCTCGTCCT 18932 >seq2239 Length=36943 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || |||||| | || || ||| | ||| Sbjct 31641 ATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTAGAGGTGGAATCCTCC 31582 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||| || | || ||||||||| Sbjct 31581 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCCGACCAG 31522 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || ||| | |||||| || || ||| || ||| Sbjct 31521 CAGCGGCTCATCTTCGCCGGTAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTACAAC 31462 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || || || Sbjct 31461 ATTCAGAAGGAGTCCACCCTCCACCTCGTGCT 31430 >seq2079 Length=38309 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||| | ||||| || || || || || |||||| | || || ||| | || Sbjct 8202 ATGCAAATTTTCATTAAGACCCTCACCGGTAAGACCATCACCCTAGAGGTCGAATCTTCT 8261 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || |||||||| ||| | || || ||||| Sbjct 8262 GACACCATTGATAATGTAAAAGCTAAGATTCAAGACAAGGAGGGCATCCCCCCAGACCAA 8321 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || ||||| || || ||||| || | || || || |||||| Sbjct 8322 CAAAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGTCGCACCTTGGCAGACTATAAC 8381 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| ||||| || |||||| |||| || || || ||||| || Sbjct 8382 ATCCAAAAGGAATCTACGCTTCATTTGGTGCTCAGGCTCAGGGGAGG 8428 >seq825 Length=54200 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| |||||||| || || || ||||||||| |||| || || || Sbjct 43391 AAGATGCAGATCTTCGTGAAGACTCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCG 43332 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || || | || ||| ||||| ||| | ||||| ||| Sbjct 43331 TCGGACACCATCGACAACGTGAAGGCCAAGATTCAGGATAAGGAGGGCATCCCGCCGGAC 43272 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||| || || ||||| || || ||| | || ||| Sbjct 43271 CAGCAGCGCCTTATCTTCGCCGGGAAGCAGCTCGAGGAC 43233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445511505200400