Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq4041 95.1 2e-14 >seq4041 Length=27173 Score = 95.1 bits (104), Expect = 2e-14 Identities = 226/339 (67%), Gaps = 2/339 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| |||||||| || |||||||| | || | ||||| || || ||||| Sbjct 731 CAGGCGAAGTCGCAGTGGAGGCCCTCGTCACGGGAGATGAGCTCGTTTGAGAAGGTGAGA 672 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| ||||| ||||| || ||||| || |||| ||| || ||||| |||||| Sbjct 671 CCCGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAG 612 Query 33702 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTAT 33760 ||||| || || ||| || || |||| || | ||| | | | | | | || Sbjct 611 ATTCCCTCGAC-GCAGGCGAAAGCAACGAGGCGCTCGGCGAACGAGCCAGAGGATTCGAT 553 Query 33761 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33820 ||| | | ||||| |||||||| ||| ||| || || || |||||| || Sbjct 552 CCAGCGTAGCGCCCACTCGGCCTTGCGGGCGACAGGAGGGATGGTGTCGATGGCACGGAA 493 Query 33821 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33880 ||| | || || | || || | || || |||| | ||| |||||| || Sbjct 492 GAGGCGGGACTTCTCGTCGGGGTCCTTGATGTAGGTGTCGAGGAGGAGAGAATACATCTC 433 Query 33881 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33919 || || ||||| || ||||| ||||| || |||||||| Sbjct 432 AGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629457462423600