Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2239 98.7 1e-15 seq1503 91.5 1e-13 seq1389 91.5 1e-13 >seq2239 Length=36943 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || |||||||| || ||| || |||| |||||||||||| ||||| Sbjct 31445 GTGGACTCCTTCTGAATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTACCG 31504 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| ||||| || || || || ||||| ||| || || Sbjct 31505 GCGAAGATGAGCCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTG 31564 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| || |||||||| | ||| | |||||||| || | ||| Sbjct 31565 ACATTGTCGATGGTGTCGGAGGATTCCACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTT 31624 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 31625 TTCACGAAGATCTGCAT 31641 >seq1503 Length=43560 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | || | || | ||| | || ||||| || || |||||||| ||| Sbjct 30438 GCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGC 30497 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| || ||||| || || || |||| || || ||||| || || || Sbjct 30498 GAGAGTGCGGCCGTCCTCCAGCTGCTTCCCTGCGAAGATGAGGCGCTGCTGGTCCGGCGG 30557 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | ||||| | | |||||| Sbjct 30558 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCCAC 30617 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | |||||| || |||||||| || ||||| || ||||| Sbjct 30618 CTCAAGGGTGATCGTCTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 30665 >seq1389 Length=44750 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | || | ||| ||||| || || ||||| |||||| | |||| | Sbjct 22571 CGCAACACCAGATGGAGCGTGGACTCCTTCTGTATGTTGTAATCGGCAAGAGTGCGGCCG 22630 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 |||||||||||||| || ||| |||| || | |||||| || || || || || || ||| Sbjct 22631 TCTTCGAGCTGTTTTCCTGCAAAGATGAGCCTTTGCTGGTCCGGCGGGATTCCCTCCTTG 22690 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| | | ||| ||||| | ||| | Sbjct 22691 TCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGCTCTCGACCTCCAAGGTAATG 22750 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || || | || || |||||||||||||| Sbjct 22751 GTCTTCCCAGTGAGAGTCTTCACGAATATTTGCAT 22785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495780344404000