Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq9829 114 2e-20 seq4041 104 3e-17 seq2268 91.5 2e-13 seq1774 89.7 7e-13 >seq9829 Length=14110 Score = 114 bits (126), Expect = 2e-20 Identities = 250/369 (68%), Gaps = 8/369 (2%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||||| || || || ||||| | || || |||||||| || ||||| Sbjct 4017 CAGGCGAAGTCGCAATGAAGGCCTTCGTCACGGGAGATAAGCTCGTTGGAGAAGGTGAGC 4076 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAA 50078 || ||||| ||||| ||||| || |||||||| || | |||| || || ||||| ||||| Sbjct 4077 CCCGGCATAAGGCCGCGCTTCTTGAGCCAAAAGATAG-CGCAGAAGGAGCCAGAGAAGAA 4135 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG--TCA-TG 50135 |||||| || | ||| ||||| ||||| | || | | || || | | | | Sbjct 4136 GATTCCCTCGAAACAGGCGAAGGCGACAAGCCGTTCGGCGAA---GGAGCCGGATGATTC 4192 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | ||||| |||||||| || | || | ||| || ||||||| Sbjct 4193 AATCCAGCGCAGGGCCCAGTCGGCCTTTCGGGAGACGGAGGGGACCGTGTCGATGGCATG 4252 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 |||||| | | || || | | || || | || || |||| | || ||||| Sbjct 4253 GAAGAGACGGGTCTTCTCGTCAGGGTCCTTGATGTAGGTGTCGAGGAGGAGGGAGTACAT 4312 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 ||||| |||||||| || ||||| ||||| || |||||||| | |||||||| | Sbjct 4313 CTCCGAGTGAATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGGGAG 4372 Query 50316 CTGCACTTC 50324 ||| || || Sbjct 4373 CTGAACGTC 4381 >seq4041 Length=27173 Score = 104 bits (114), Expect = 3e-17 Identities = 228/339 (67%), Gaps = 2/339 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| |||||||| || |||||||| | || || ||||| || || ||||| Sbjct 731 CAGGCGAAGTCGCAGTGGAGGCCCTCGTCACGGGAGATGAGCTCGTTTGAGAAGGTGAGA 672 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAAAGAA 50078 || ||||| ||||| ||||| || ||||| || |||| |||| || || || || ||||| Sbjct 671 CCCGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGG-CGCAGAAGGAGCCGGAGAAGAA 613 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTAT 50138 |||||| || || ||| || ||||| || | ||| | | | | | | || Sbjct 612 GATTCCCTCGACGCAGGCGAAAGCAACGAGGCGCTCGGCGAACGAGCCAGAGGATTCGAT 553 Query 50139 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 ||| | | ||||| |||||||| ||| ||| || || || |||||| || Sbjct 552 CCAGCGTAGCGCCCACTCGGCCTTGCGGGCGACAGGAGGGATGGTGTCGATGGCACGGAA 493 Query 50199 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 50258 ||| | || || | || || | || || |||| | ||| |||||| || Sbjct 492 GAGGCGGGACTTCTCGTCGGGGTCCTTGATGTAGGTGTCGAGGAGGAGAGAATACATCTC 433 Query 50259 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 50297 || || ||||| || ||||| ||||| || |||||||| Sbjct 432 AGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 394 >seq2268 Length=36762 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 |||||| ||||| | || | ||| || | ||| | || || | |||||||| |||||| Sbjct 24542 TCCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATTGGAACAATACC 24601 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 ||| ||||| ||||| ||||| |||||| || || | || || || || || || Sbjct 24602 ATTAGATGTTCCATTTGTCCCACGGATATAACTGCCTGTTGCCCGGATGTTGTGAACAGA 24661 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 | ||| ||||| || || || |||| || || || | ||||||||| || Sbjct 24662 AACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTAAGCGTATCATATAT 24721 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316 ||||| ||||||||||| ||||| | | ||||||||| Sbjct 24722 CCCCTCAATGCTATCATCTTTCATGCATATCAAGAAACAGCTA 24764 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || || || || |||||| ||| | | ||| ||| ||| | ||| || | ||| ||| Sbjct 23244 TCAAATTCATCACCCCAACAATCAGCAAGTCCTGGAGCTTCATTAGGGCAAAACAATGAC 23303 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || | ||||| | || |||| || |||||||||||||||||||||||| || ||| Sbjct 23304 CATTGTCCATTACTCTGAACTCTTTCCATAAAGAGATCAGGAATCCAAAGGGCATAAAAC 23363 Query 79981 AGATCTCTGGTTCTATGCTCCTC 80003 || || || | ||||||||| || Sbjct 23364 AGGTCCCTAGCTCTATGCTCTTC 23386 >seq1774 Length=40918 Score = 89.7 bits (98), Expect = 7e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 80085 TCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 80144 || |||| |||||| ||||| | || | ||| || | ||| | || || | ||| || Sbjct 29347 TCTTTTGCCTCCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATGGG 29406 Query 80145 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 80204 || ||||||||||||||| ||||| || || |||||| ||||| | ||||| || || Sbjct 29407 AACAATACCATTGGATGTTCCATTTGTGCCACGGATATAACTTCCTGTTGCACGGATGTT 29466 Query 80205 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 80264 || || | ||| ||||| || || || |||| || || || | || Sbjct 29467 GTGAACAGAAACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTCAGAGT 29526 Query 80265 ATCATAGATGCCCTCTATGCTATCATCAATCATG 80298 |||||| || ||||| |||||||| || ||||| Sbjct 29527 ATCATATATTCCCTCAATGCTATCTTCTTTCATG 29560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717858084921800