Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq9829 93.3 6e-14 seq2268 87.8 2e-12 seq1774 84.2 3e-11 >seq9829 Length=14110 Score = 93.3 bits (102), Expect = 6e-14 Identities = 228/342 (67%), Gaps = 8/342 (2%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| ||||| || || || || || | || | |||||||| || ||||| Sbjct 4017 CAGGCGAAGTCGCAATGAAGGCCTTCGTCACGGGAGATAAGCTCGTTGGAGAAGGTGAGC 4076 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCAGAAAAGAA 42183 || ||||| ||||| ||||| || |||||||| |||| |||| || || ||||| ||||| Sbjct 4077 CCCGGCATAAGGCCGCGCTTCTTGAGCCAAAAGATAG-CGCAGAAGGAGCCAGAGAAGAA 4135 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC---ATAACCGGCACTGTCATG 42240 |||||| || | || ||||| | ||| | || | | |||| ||| Sbjct 4136 GATTCCCTCGAAACAGGCGAAGGCGACAAGCCGTTCGGCGAAGGAGCCGGATGATTCA-- 4193 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | ||||| |||||||| || | || | ||| || ||||||| Sbjct 4194 -ATCCAGCGCAGGGCCCAGTCGGCCTTTCGGGAGACGGAGGGGACCGTGTCGATGGCATG 4252 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 |||||| | | || || | | || || | || || |||| | || ||||| Sbjct 4253 GAAGAGACGGGTCTTCTCGTCAGGGTCCTTGATGTAGGTGTCGAGGAGGAGGGAGTACAT 4312 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 42402 || || |||||||| || ||||| ||||| || |||||||| Sbjct 4313 CTCCGAGTGAATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 4354 >seq2268 Length=36762 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || || || || |||||| || | | ||| ||| |||||| || || | ||||||| Sbjct 23244 TCAAATTCATCACCCCAACAATCAGCAAGTCCTGGAGCTTCATTAGGGCAAAACAATGAC 23303 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || | ||||| | | |||| || |||||||||||||||||||||||| || ||| Sbjct 23304 CATTGTCCATTACTCTGAACTCTTTCCATAAAGAGATCAGGAATCCAAAGGGCATAAAAC 23363 Query 72064 AGATCTCTGGTTCTATGCTCCTC 72086 || || || | ||||||||| || Sbjct 23364 AGGTCCCTAGCTCTATGCTCTTC 23386 >seq1774 Length=40918 Score = 84.2 bits (92), Expect = 3e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 72171 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 72230 |||| |||||| ||||| | || | ||| || | ||| | || || | ||| |||| Sbjct 29350 TTTGCCTCCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATGGGAAC 29409 Query 72231 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCT 72290 |||||||||||||| ||||| || || |||||| ||||| | ||||| || ||| Sbjct 29410 AATACCATTGGATGTTCCATTTGTGCCACGGATATAACTTCCTGTTGCACGGATGTTGTG 29469 Query 72291 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 72350 || || | ||| ||||| || || || |||| || || || | ||||| Sbjct 29470 AACAGAAACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTCAGAGTATC 29529 Query 72351 ATAGATGCCCTCTATACTATCATCCATCATG 72381 ||| || ||||| || ||||| || ||||| Sbjct 29530 ATATATTCCCTCAATGCTATCTTCTTTCATG 29560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670755434216200