Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2079 104 2e-17 seq1389 89.7 4e-13 >seq2079 Length=38309 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTTCTAATTG 15219 || ||||| || || || || |||||||| || ||| || | | |||| |||||||| Sbjct 8632 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCTAAGG-TGCGACCGTCCTCTAATTG 8574 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| ||||| |||||| | ||| || || | ||| ||||||||||| ||| || Sbjct 8573 TTTCCCAGCAAATATCAGCCTTTGCTGATCAGGGGTAATACCTTCTTTGTCTTGAATCTT 8514 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||||||| | || || || || | |||||| || | ||| ||||| ||||| || Sbjct 8513 AGCCTTTACATTATCGATAGTGTCAGAAGATTCTACCTCAAGGGTGATGGTCTTACCGGT 8454 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||||||||||||| Sbjct 8453 GAGGGTCTTAACAAAAATTTGCAT 8430 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTT 15212 ||| |||||||| || ||||| ||||| ||||| || || || || | | | || | Sbjct 8183 AACCAAATGAAGCGTAGAATCCTTTTGGATGTTATAGTCTGCCAAGG-TGCGACCTTCCT 8125 Query 15213 CTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCAC 15272 ||| ||| || ||||| | ||||| ||||||||||| || || || || || || Sbjct 8124 CTAGTTGCTTCCCAGCAAAGATCAACCGTTGTTGGTCTGGGGGGATGCCCTCCTTATCTT 8065 Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 ||| ||| ||| ||| | || ||||| || | ||| || |||| ||| ||||| | Sbjct 8064 GAATCTTGGCCTTAACATTATCAATGGTGTCAGAAGATTCGACCTCTAGGGTGATGGTCT 8005 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| || || || || | ||||||||||| Sbjct 8004 TACCGGTGAGGGTCTTAATGAAAATTTGCAT 7974 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTCTTC 15213 || |||||||| || || || ||||| ||||| || || || || | | | || || Sbjct 8410 ACCAAATGAAGCGTAGATTCCTTTTGGATGTTATAGTCTGCCAAGG-TGCGACCATCCTC 8352 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 ||||| || ||||| | ||||| | ||||||||| || || || || ||||| Sbjct 8351 CAATTGCTTCCCAGCAAAGATCAACCTTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTG 8292 Query 15274 AATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 ||| || ||| |||||| | || ||||| || | ||| || |||| ||| ||||| | Sbjct 8291 AATCTTAGCT-TTTACATTATCAATGGTGTCAGAAGATTCGACCTCTAGGGTGATGGTCT 8233 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| || || || || | ||||||||||| Sbjct 8232 TACCGGTGAGGGTCTTAATGAAAATTTGCAT 8202 >seq1389 Length=44750 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| || ||||| || || ||||||||||||||| ||| | | ||||| Sbjct 22574 AACACCAGATGGAGCGTGGACTCCTTCTGTATGTTGTAATCGGCAAGAGTGCGGCCGTCT 22633 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||||| || || | || | | ||| ||||| || ||||| || ||||| Sbjct 22634 TCGAGCTGTTTTCCTGCAAAGATGAGCCTTTGCTGGTCCGGCGGGATTCCCTCCTTGTCC 22693 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 || ||| ||| ||| | || ||||| || | || || || ||||||||||| Sbjct 22694 TGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGCTCTCGACCTCCAAGGTAATGGTC 22753 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || || |||||||| Sbjct 22754 TTCCCAGTGAGAGTCTTCACGAATATTTGCAT 22785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361977278871045