Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2239 93.3 4e-14 seq1389 93.3 4e-14 seq20732 91.5 1e-13 >seq2239 Length=36943 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| ||||||||||| || ||||| || |||| || |||||| Sbjct 31439 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGC 31498 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 |||||| || | || | |||||||| || || | | |||||||| || || Sbjct 31499 TTACCGGCGAAGATGAGCCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCTTGGATCTTG 31558 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| |||| || ||| ||| | || ||||| || || ||| Sbjct 31559 GCCTTGACATTGTCGATGGTGTCGGAGGATTCCACCTCTAGGGTGATGGTCTTGCCAGTG 31618 Query 48704 AGAGTTTTCACAAAAATCTGCATC 48727 || |||||||| || ||||||||| Sbjct 31619 AGGGTTTTCACGAAGATCTGCATC 31642 >seq1389 Length=44750 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || |||||||| || |||| ||| ||||||| |||||||| ||| || | Sbjct 22367 TCCTTCTGTATGTTGTAGTCCGCCAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAG 22426 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAG 48653 || | | |||||| ||| ||| | | ||||||||| || || ||||| | | Sbjct 22427 ATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 22486 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 || ||||| || | |||| ||| | ||| || || || |||||||||||||| | Sbjct 22487 TCG--ATGGTGTCTGAGCTCTCCACCTCCAGTGTGATCGTCTTCCCGGTGAGAGTTTTGA 22544 Query 48714 CAAAAATCTGCATC 48727 |||| ||||||||| Sbjct 22545 CAAATATCTGCATC 22558 >seq20732 Length=5382 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||| ||||||||| |||||||| ||||| || || || | ||||| || || Sbjct 5242 TGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC-AAGGGTGCGGCCATCCTCGAGTTG 5184 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || || | || | | ||||||||| || | | |||||||||| || || Sbjct 5183 CTTGCCAGCGAAGATGAGCCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTT 5124 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | ||||||| || | || || ||| | || ||||| || ||||| Sbjct 5123 GGCCTTGACATTGTCTATGGTGTCAGAGGATTCAACCTCAAGGGTGATGGTCTTTCCGGT 5064 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||||||||| ||||| |||||||| Sbjct 5063 GAGAGTTTTGACAAAGATCTGCAT 5040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421016345215745