Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq6402 547 2e-151 seq18603 109 2e-19 seq10775 80.6 8e-11 >seq6402 Length=20154 Score = 547 bits (606), Expect = 2e-151 Identities = 714/985 (72%), Gaps = 2/985 (0%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || ||||| ||||| ||||| | || ||||| || || | Sbjct 18608 TTCTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGGTGGTTCGGTGTTTTG 18667 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| | || || || || || || Sbjct 18668 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCTCCT 18727 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || ||||| || ||||| || || || | |||||||| ||| Sbjct 18728 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGTTCTCTACTTTACGGAAATAAT 18787 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||| ||||| || | |||| | || || ||||| | || ||||| || ||| Sbjct 18788 ATTATCTCTGGTGCTATTATTCCTACTTCTGCAGCTATAGGTTTACATTTTTACCCAATC 18847 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | || | ||||||||||||||||| || ||||| ||| | || |||| Sbjct 18848 TGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 18907 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||||||| | || ||||| ||| ||| | |||||||||| || | | Sbjct 18908 CTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 18967 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| || | |||| ||| |||| Sbjct 18968 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 19027 Query 19710 GTGTTTCTCGTTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATC 19769 || ||| | | ||||| |||| ||||| ||||| ||||||||||||| | || || Sbjct 19028 GTTTTTTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATA 19087 Query 19770 TCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCG 19829 ||||||||||| ||||||||| | |||||||| || |||||||| |||||||||||||| Sbjct 19088 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAACACAACATCCTTATGCATCCA 19147 Query 19830 TTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGA 19889 || |||||| | ||||| ||||| |||||||| || || || ||| ||||||||| || Sbjct 19148 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 19207 Query 19890 AGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGC 19949 ||||| || || | |||| |||||| ||||| | | ||| ||| || Sbjct 19208 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAACGCAGGT 19267 Query 19950 TATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGG 20009 || | ||||| ||||| |||||||| |||||||| || ||||| || || || ||||| Sbjct 19268 TACAGATTCGGTCAAGAGGAAGAGACTTATAATATCGTAGCTGCTCATGGTTATTTTGGC 19327 Query 20010 AGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCT 20069 ||||||| || ||||||||| ||| || ||||||||||||||||||||||| | ||| Sbjct 19328 CGATTGATCTTCCAATATGCTAGTTTTAACAATTCTCGTTCTTTACATTTCTTCTTGGCT 19387 Query 20070 ACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAAC 20129 ||| || || |||| || ||| | || | | || || |||| |||||||||||| Sbjct 19388 GCTTGGCCTGTAATTGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGGCTTTCAAC 19447 Query 20130 CTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGA-TGTCAACGGAAAGATAATCCCAAC 20188 || |||||||| || || ||||| || |||||||| ||| | || | || || Sbjct 19448 CTAAATGGTTTCAATTTCAACCAATCCGTAGTTGACAGTC-AGGGTCGTGTCATTAACAC 19506 Query 20189 ATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGC 20248 ||||||||| | | || | |||||||| || | ||||| ||||| || || ||||| Sbjct 19507 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGC 19566 Query 20249 TCATAACTTCCCACTTGATTTAGCT 20273 ||| |||||||| || || ||||| Sbjct 19567 TCACAACTTCCCTCTGGACCTAGCT 19591 >seq18603 Length=6435 Score = 109 bits (120), Expect = 2e-19 Identities = 121/156 (78%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 19706 TGCTGTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTG 19764 |||||| ||||| | | || || |||| ||||| | || ||||||||||||| | | Sbjct 3451 TGCTGT-TTTCTTGATCTATCCTATTGGTCAAGGACGCTTCCCTGATGGTATGCCTTTAG 3393 Query 19765 GTATCTCTGGTACTTTTAACTTTATGT-TCGTATTCCAAGCAGAACACAATATCCTTATG 19823 | || ||||||| ||| ||||| |||| | ||||| | ||||||||||| ||||||||| Sbjct 3392 GAATATCTGGTA-TTTCAACTTCATGTATTGTATTTCTGGCAGAACACAACATCCTTATG 3334 Query 19824 CATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTC 19859 |||| | | |||||| | ||||| |||| |||||| Sbjct 3333 CATCTGGTTCACATGTTAGGTGTAACTGGTGTATTC 3298 >seq10775 Length=12944 Score = 80.6 bits (88), Expect = 8e-11 Identities = 94/126 (75%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 19729 TTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTA 19788 |||| |||| ||| || ||||||||||||||| || || ||||||||| || || | Sbjct 12083 TTGGTGAAGGAAGTGTTCCTGATGGTATGCCTCTAGGAATATCTGGTACTGATACTTTCA 12142 Query 19789 --TGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGT 19846 | | ||| || | || || ||||| |||||||||||||| || ||||| | ||||| Sbjct 12143 ACTTATTGTACTCTAGGCTGAGCACAACATCCTTATGCATCCATTGAACATGTTAGGTGT 12202 Query 19847 TGCTGG 19852 | ||| Sbjct 12203 AGTTGG 12208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144363136163220