Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq6402 544 1e-149 seq18603 104 4e-17 >seq6402 Length=20154 Score = 544 bits (602), Expect = 1e-149 Identities = 692/946 (73%), Gaps = 6/946 (1%) Strand=Plus/Plus Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATC 211668 |||| ||||| |||||| | |||||||| | ||| | | | ||||| | ||||| Sbjct 18648 TTGGGTGGTTCGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATT 18706 Query 211669 GTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGT 211728 | || ||||| || || ||||| || ||||| || || || |||||||| || ||||| Sbjct 18707 ATTGCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGT 18766 Query 211729 TCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATC 211788 || | | || || || || || ||||||||||| || |||| |||| || || Sbjct 18767 TCTCTACTTTACGGAAATAATATTATCTCTGGTGCTATTATTCCTACTTCTGCAGCTATA 18826 Query 211789 GGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGT 211848 |||||||| || || || ||||||||||||||| || ||||||||||| | ||||||||| Sbjct 18827 GGTTTACATTTTTACCCAATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGT 18886 Query 211849 GGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGA 211908 |||||||| || | | | | |||||| | | || | | |||||||| | Sbjct 18887 GGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGT 18946 Query 211909 CAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCA 211968 ||||||||||| | |||| | ||||||||||||||||| |||||| |||||||| Sbjct 18947 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 19006 Query 211969 CCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCA 212028 ||||| |||| ||| ||||| || | | ||||| | ||||| || ||||| Sbjct 19007 CCTGTTGCAGCTGCTACTGCTGTTTTTTTGATCTACCCTATTGGTCAAGGAAGTTTCTCT 19066 Query 212029 GACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAA 212088 || |||||||||||||| ||||| || || |||||||| ||| | |||||||| || ||| Sbjct 19067 GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAA 19126 Query 212089 CATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCA 212148 || |||||||||||||| ||||| || ||| |||||| || ||| | ||||| || | Sbjct 19127 CACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCC 19186 Query 212149 TTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGT 212208 ||||| ||||||||| ||||| | || || ||| | ||| | |||||||||| Sbjct 19187 CTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAA 19246 Query 212209 TTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTT 212268 || || ||| ||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 19247 AACGAATCTGCTAACGCAGGTTACAGATTCGGTCAAGAGGAAGAGACTTATAATATCGTA 19306 Query 212269 GCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGA 212328 ||||| ||||| || || || || | |||||||| ||||| || ||||| | Sbjct 19307 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTTAACAATTCTCGT 19366 Query 212329 AGTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGT 212388 |||||| |||||| | || | |||||||| || || | ||||| || || | ||| Sbjct 19367 TCTTTACATTTCTTCTTGGCTGCTTGGCCTGTAATTGGTATCTGGTTCACTGCTTTAGGT 19426 Query 212389 ATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCA 212448 || |||| ||||| |||||||||||||| ||||| ||||||||||| || ||||| || Sbjct 19427 ATTAGCACCATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGA--CA 19484 Query 212449 -TCA-GGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGG 212506 ||| ||| || || ||||||| |||| | | ||| | || ||||||||||||| Sbjct 19485 GTCAGGGTCGTGTCATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGG 19544 Query 212507 AAGTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||| ||||| ||| | ||||| ||||||||||| || ||| |||| Sbjct 19545 AAGTAATGCATGAACGTAATGCTCACAACTTCCCTCTGGACCTAGC 19590 >seq18603 Length=6435 Score = 104 bits (114), Expect = 4e-17 Identities = 150/208 (72%), Gaps = 9/208 (4%) Strand=Plus/Minus Query 211933 GGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTA 211992 ||||||| || |||||| |||||| |||||||| | | |||||| ||||| Sbjct 3497 GGTATGCATCTTTGGATTGTTGTTGCATATTCAGCTTCGTT----GCAGCT---GCTGTT 3445 Query 211993 TTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGTATATCA 212052 ||| | | || || | ||||| || ||| | || |||||||||||||| ||||| Sbjct 3444 TTCTTGATCTATCCTATTGGTCAAGGACGCTTCCCTGATGGTATGCCTTTAGGAATATCT 3385 Query 212053 GGAACATTCAACTTCATGT-TCGTATTCCAAGCAGAACATAACATCCTTATGCACCCATT 212111 || | ||||||||||||| | ||||| | |||||||| |||||||||||||| | | Sbjct 3384 GGTAT-TTCAACTTCATGTATTGTATTTCTGGCAGAACACAACATCCTTATGCATCTGGT 3326 Query 212112 CCATATGGCAGGTGTTGCAGGTATGTTC 212139 || ||| |||||| | ||| | ||| Sbjct 3325 TCACATGTTAGGTGTAACTGGTGTATTC 3298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807093429842200