Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq9829 102 1e-16 seq4041 95.1 2e-14 >seq9829 Length=14110 Score = 102 bits (112), Expect = 1e-16 Identities = 245/368 (67%), Gaps = 6/368 (2%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||||| || || || ||||| | || || |||||||| || ||||| Sbjct 4017 CAGGCGAAGTCGCAATGAAGGCCTTCGTCACGGGAGATAAGCTCGTTGGAGAAGGTGAGC 4076 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| ||||| ||||| || |||||||| || | ||| || ||||| |||||| Sbjct 4077 CCCGGCATAAGGCCGCGCTTCTTGAGCCAAAAGATAGCGCAGAAGGAGCCAGAGAAGAAG 4136 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG--TCA-TGT 33480 ||||| || | || ||||| | ||| | || | | || || | | | | Sbjct 4137 ATTCCCTCGAAACAGGCGAAGGCGACAAGCCGTTCGGCGAA---GGAGCCGGATGATTCA 4193 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| | ||||| |||||||| || | || | ||| || ||||||| Sbjct 4194 ATCCAGCGCAGGGCCCAGTCGGCCTTTCGGGAGACGGAGGGGACCGTGTCGATGGCATGG 4253 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 |||||| | | || || | | || || | || || |||| | || ||||| Sbjct 4254 AAGAGACGGGTCTTCTCGTCAGGGTCCTTGATGTAGGTGTCGAGGAGGAGGGAGTACATC 4313 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 ||||| |||||||| || ||||| ||||| || |||||||| | |||||||| | | Sbjct 4314 TCCGAGTGAATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGGGAGC 4373 Query 33661 TGTACTTC 33668 || || || Sbjct 4374 TGAACGTC 4381 >seq4041 Length=27173 Score = 95.1 bits (104), Expect = 2e-14 Identities = 226/339 (67%), Gaps = 2/339 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| |||||||| || |||||||| | || || ||||| || || ||||| Sbjct 731 CAGGCGAAGTCGCAGTGGAGGCCCTCGTCACGGGAGATGAGCTCGTTTGAGAAGGTGAGA 672 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| ||||| ||||| || ||||| || |||| ||| || || || |||||| Sbjct 671 CCCGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAG 612 Query 33424 ATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTAT 33482 ||||| || || ||| || || |||| || | ||| | | | | | | || Sbjct 611 ATTCCCTCGAC-GCAGGCGAAAGCAACGAGGCGCTCGGCGAACGAGCCAGAGGATTCGAT 553 Query 33483 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 ||| | | ||||| |||||||| ||| ||| || || || |||||| || Sbjct 552 CCAGCGTAGCGCCCACTCGGCCTTGCGGGCGACAGGAGGGATGGTGTCGATGGCACGGAA 493 Query 33543 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33602 ||| | || || | || || | || || |||| | ||| |||||| || Sbjct 492 GAGGCGGGACTTCTCGTCGGGGTCCTTGATGTAGGTGTCGAGGAGGAGAGAATACATCTC 433 Query 33603 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33641 || || ||||| || ||||| ||||| || |||||||| Sbjct 432 AGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622590991004200