Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1711 102 2e-16 seq1774 93.3 1e-13 seq2268 89.7 1e-12 >seq1711 Length=41522 Score = 102 bits (112), Expect = 2e-16 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 371100 GCACCATGACTAATGATGGAATCCTTCTCCATCTCACCAATTCGGAGACCACCATCGCGT 371159 ||||| || ||| ||| | || ||||||||||||||| || ||||||||||| || Sbjct 25743 GCACCGTGTGCAATCATGCAGTCTCTCTCCATCTCACCAAACCGAAGACCACCATCTCGA 25684 Query 371160 GACCGTCCTTCTGTTGGCGCGCGTGTAAGTAGCTGTTGTGCACCGCGGTTGCGTGCATGT 371219 || |||||||||| |||| | ||||||| ||| | ||| || || | ||| Sbjct 25683 GAGCGTCCTTCTGCTGGCTGTCTGGTAAGTATCTGCACAGGACCACGCCCTCGAGAATGG 25624 Query 371220 GACTTGTCAACTACCATGTGCTTGAGGCGCTGATAATAACACGGAGCAATAAAAATCATA 371279 ||| ||| | ||||||||||| || | ||||||||| ||| ||| ||| |||||| Sbjct 25623 ATCTTATCATCGACCATGTGCTTCAGTCTCTGATAATATGTAGGACCAAGAAATATCATA 25564 Query 371280 G 371280 | Sbjct 25563 G 25563 >seq1774 Length=40918 Score = 93.3 bits (102), Expect = 1e-13 Identities = 155/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| ||| ||||| || | ||| || || ||| | |||||| | || | Sbjct 29559 ATGAAAGAAGATAGCATTGAGGGAATATATGATACTCTGAAGGAGTGTGCTATAATAAGC 29500 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA-CAGAACAGTTACAT 363740 ||| || || ||||||||||| || | ||||| | |||||| ||| | ||||| || Sbjct 29499 AAGTCAGCTGGAGGAATTGGTGTTTCTGTTCACAACATCCGTGCAACAGGA-AGTTATAT 29441 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 || |||||| ||| || ||||| | ||||||||||| | ||||| | |||| Sbjct 29440 CCGTGGCACAAATGGAACATCCAATGGTATTGTTCCCATGCTAAGGGTGTTCAATGATAC 29381 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 ||| | || || || || || ||||| || | |||||| Sbjct 29380 TGCTCGTTATGTTGATCAAGGAGGAGGCAAAAG-AAAGGG 29342 >seq2268 Length=36762 Score = 89.7 bits (98), Expect = 1e-12 Identities = 154/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| ||| ||||| || | ||| || |||||| | |||||| | || | Sbjct 24745 ATGAAAGATGATAGCATTGAGGGGATATATGATACGCTTAAGGAGTGTGCTATAATAAGC 24686 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 ||| || || ||||||||||| || | ||||| | || || |||| |||||| || Sbjct 24685 AAGTCAGCTGGAGGAATTGGTGTTTCTGTTCACAACATCCGGGCAACAG-GCAGTTATAT 24627 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 || || ||| ||| || ||||| | ||||| ||||| | ||||| | |||| Sbjct 24626 CCGTGGGACAAATGGAACATCTAATGGTATTGTTCCAATGCTAAGGGTGTTCAATGATAC 24567 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 ||| | || || || || || ||||| ||| | |||||| Sbjct 24566 TGCTCGTTATGTTGATCAAGGAGGAGGCAAGAG-AAAGGG 24528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302589694272590