Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5201 98.7 9e-16 seq12074 89.7 4e-13 seq20732 86.0 5e-12 >seq5201 Length=23257 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||||||| | || ||| |||| || ||| | Sbjct 11291 ATGCAGATCTTTGTTAAGACGCTCACTGGAAAAACCATCACCCTCGAGGTGGAGAGCTCG 11232 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| ||||| |||||||| ||||| |||||||| || Sbjct 11231 GACACCATCGACAACGTCAAAGCTAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAG 11172 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || || || || | || ||||||||| ||||| || | | | ||| || || || || Sbjct 11171 CAAAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCG-CACGCTTGCGGACTACAA 11113 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || ||||| || || Sbjct 11112 CATCCAGAAAGAGTCGAC 11095 >seq12074 Length=11460 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| || | || ||| | || || ||| | Sbjct 3230 ATGCAAATCTTCGTCAAGACTTTGACTGGGAAGACCATCACCCTTGAGGTGGAGAGCTCG 3289 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||| || || || || || || || Sbjct 3290 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAG 3349 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | ||||||||| || || |||| | | | | | ||||| ||| Sbjct 3350 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCAGATTACAAC 3409 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || ||||| || |||| | ||| | ||| | || ||||| Sbjct 3410 ATTCAGAAGGAATCCACCCTTCACCTTGTGCTGAGACTTAGGGGAGG 3456 >seq20732 Length=5382 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | |||||||| |||| ||| | || || || || Sbjct 4812 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACGATCACCCTTGAGGTTGAATCCTCT 4871 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| || || || || ||||| || ||||| Sbjct 4872 GACACAATTGACAATGTCAAAGCCAAGATTCAGGATAAGGAGGGAATACCCCCGGATCAG 4931 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || || || | | ||||||||||| || |||| | | | | | ||| || ||| Sbjct 4932 CAAAGGCTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTGGCCGACTACAAC 4991 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||| || || || Sbjct 4992 ATCCAAAAGGAGTCCAC 5008 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | || ||||| | || ||| | || || || || Sbjct 5040 ATGCAGATCTTTGTCAAAACTCTCACCGGAAAGACCATCACCCTTGAGGTTGAATCCTCT 5099 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 5100 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 5159 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || || || | || |||||||||||||| |||| | | | | | || || ||| Sbjct 5160 CAAAGGCTCATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACCCTTGCTGACTACAAC 5219 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||| || || || Sbjct 5220 ATCCAAAAGGAGTCCAC 5236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429696303290475