Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq20732 102 7e-17 seq2079 87.8 2e-12 seq7691 86.0 5e-12 >seq20732 Length=5382 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| ||||| ||||| || || ||| | || || ||| Sbjct 4812 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACGATCACCCTTGAGGTTGAATCCTCT 4871 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || ||| || ||| ||||| || || | ||| ||||| Sbjct 4872 GACACAATT-GACAATGTCAAAGCCAAGATTCAGGATAAGGAGGGAATACCCCCGGATCA 4930 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| || || | ||| ||||| ||| | || |||| | ||| ||||||| || || Sbjct 4931 GCAAAGGCTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTGGCCGACTACAA 4990 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||| ||||| ||||| || Sbjct 4991 CATCCAAAAGGAGTCCAC 5008 >seq2079 Length=38309 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || ||||| || || ||||| ||| | || || || Sbjct 8429 AATGCAAATTTTTGTTAAGACCCTCACCGGTAAGACCATCACCCTTGAGGTAGAATCTTC 8488 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | | ||||| || ||| || |||||||| | || |||||| Sbjct 8489 TGACACTATCGATAATGTAAAGGCTAAGATTCAAGACAAAGAAGGTATTACCCCTGATCA 8548 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| || || | ||| || ||||||||||| || | ||| | || || || || Sbjct 8549 GCAAAGGCTGATATTTGCTGGGAAACAATTAGAGGACGGTCGCACCTTAGCGGACTACAA 8608 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||| || || |||||||| | || ||||| Sbjct 8609 CATCCAGAAGGAGTCTACCCTCCACCTGGTG 8639 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| | || || ||||| || || ||||| ||| | || || || Sbjct 8201 AATGCAAATTTTCATTAAGACCCTCACCGGTAAGACCATCACCCTAGAGGTCGAATCTTC 8260 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | |||||| || ||| || || || ||| ||||| || || Sbjct 8261 TGACACCATTGATAATGTAAAAGCTAAGATTCAAGACAAGGAGGGCATCCCCCCAGACCA 8320 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||| | || | ||| || || ||||| || |||| ||| |||| || ||||| Sbjct 8321 ACAAAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGTCGCACCTTGGCAGACTATAA 8380 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| ||||| || ||||| | ||| ||||| | || | | ||||||| Sbjct 8381 CATCCAAAAGGAATCTACGCTTCATTTGGTGCTCAGGCTCAGGGGAGGAA 8430 >seq7691 Length=17496 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| ||||| || || ||||| ||| |||| ||| | Sbjct 17410 ATGCAAATCTTTGTCAAAACCCTCACCGGGAAGACCATCACCCTCGAGGTTGAGAGCTCG 17351 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | ||||| || || ||| || || || || ||| |||| || || Sbjct 17350 GACAC-CATAGACAACGTGAAGGCAAAGATACAGGACAAGGAGGGCATCCCTCCAGACCA 17292 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || || || | ||| ||||| || || || |||| | ||| ||||||| ||||| Sbjct 17291 ACAGAGGCTCATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGGCCGACTATAA 17232 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 ||| || || || ||||| | || ||||| |||| Sbjct 17231 CATCCAGAAGGAATCTACCCTCCACTTGGTGCTGAG 17196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425106863409400