Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq12074 93.3 3e-14 seq5201 89.7 4e-13 seq32070 86.0 5e-12 >seq12074 Length=11460 Score = 93.3 bits (102), Expect = 3e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || |||||||| ||||| ||| ||||||||||||||||||||||||| || Sbjct 3675 AGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGG 3616 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||| ||||| || ||||| ||||| | |||||||||| || | | ||| Sbjct 3615 CCGTCCTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGAATCCCCTCC 3556 Query 34030 TTGTCC 34035 |||||| Sbjct 3555 TTGTCC 3550 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| || || | |||||| || ||||| ||| |||||||||||||||||||||||| Sbjct 3456 CCTCCCCTAAGTCTCAGCACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 3397 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | |||||||||||||| || || | |||||| ||| || Sbjct 3396 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 3337 Query 34021 ACGCTCTCTTTGTCCATAATTTT 34043 | | ||| |||||| ||| || Sbjct 3336 ATACCCTCCTTGTCCTGAATCTT 3314 >seq5201 Length=23257 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||||| ||||||||| || ||||| ||||||||| ||||||||||| || Sbjct 10837 CCTCCCCTCAGCCTCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCAGCA 10896 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || |||| || | |||||||| || || || || | |||||| ||| ||| Sbjct 10897 AGAGTG-CGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATGAGCCTCTGCTGGTCCGGCGG 10955 Query 34020 CACGCTCTCTTTGTCC 34035 | | ||| |||||| Sbjct 10956 GATCCCCTCCTTGTCC 10971 >seq32070 Length=2310 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || |||||||| ||||| ||| ||||||||||||||||||||||||| || Sbjct 1128 AGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGG 1069 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 |||| |||| ||||| || ||||| || || | |||||||||| Sbjct 1068 CCGTCCTCCAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCC 1024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396841030887490