Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq44304 158 5e-34 seq34219 123 1e-23 seq29720 82.4 3e-11 >seq44304 Length=1085 Score = 158 bits (174), Expect = 5e-34 Identities = 480/726 (66%), Gaps = 18/726 (2%) Strand=Plus/Plus Query 54471 AAGGACAAGGTGCTGTCGTTCGAGGAGCTGGGCGTCGACCGCCTGTTCGTCGACGAGTTC 54530 |||||| | | ||| || || |||| | |||||||||| | |||||||||| Sbjct 150 AAGGACGATCTCCTGACGATCTCGGAGATCGGCGTCGACCAGATCATCGTCGACGAAGCG 209 Query 54531 CACGAATTCCGCAAACTCGACTTCGCGACGCAGCAGGGCAACATC-AAGGGCATCGACCC 54589 || || ||| | || ||| |||||| || || || | | || | ||||| || ||||| Sbjct 210 CAGGAGTTCAGGAAGCTCTCCTTCGCCAC-CAACATGTCGACGTTGAAGGGGATAGACCC 268 Query 54590 GGCCGGCTCGCAGCGCGCGATGGACCTGTTCATGAAGGCGCAATACCTGCGCTCGAAGAA 54649 ||||||||||||||| |||||| | ||||| ||| | | | | |||| || Sbjct 269 CAACGGCTCGCAGCGCGCCTGGGACCTCTATGTGAAGTCGCGCTTCGTCCAAACGAAAAA 328 Query 54650 GCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCCGATCACGAACACGATGGGCGAGCT 54709 || ||||| ||||||||| ||| || |||||||||||||| |||||| | |||||| | Sbjct 329 CCCAGGCCGGGCGCTCGTCCTCGCCTCCGGCACGCCGATCACCAACACGCTTGGCGAGAT 388 Query 54710 GTTCACGGTGCAACGCTTCTTCCAGCCCGAGCAGATGGCCGAGGACGGTCTGGACACGTT 54769 |||| | ||||| |||| || || | || |||| || ||| || ||| Sbjct 389 GTTCTCCGTGCAGCGCTATCTCGGTTACGCTGCGCTGCTCGAGCGTGGACTGCACGAGTT 448 Query 54770 CGACGCGTGGGC--GAACCAGTACGGCGACGTCGTGGCGGGCTTCGAGCAGAACGCGGCG 54827 ||| || ||||| ||| | ||||||||| | | | |||||| | | | Sbjct 449 CGATGCCTGGGCCTCGACC--TTCGGCGACGTGTCGACCGAACTCGAGCTCCAACCCTCC 506 Query 54828 GGCGGCTATGAAGTC-GTCAGCCGCTTCGCGAAGTTCCAGAACGTGCCGGAGCTGATGCG 54886 ||| || ||| | || | |||||||| | || ||||| ||||||||||| || Sbjct 507 GGCAAATA-CAAGCCGGTTACGCGCTTCGCCACCTTTGTCAACGTCCCGGAGCTGAT-CG 564 Query 54887 CCGCG-TGCGCTCGTTCATGGACATCCTGACGAGCTCGCAGCTCTCGCAGTACGTCGACC 54945 || | | ||||| ||| |||| | ||| | | | | || |||||| || | Sbjct 565 CCATGTTCCGCTCCTTCGCGGACGTGGTGATGCCCGAGGATCTGCGGCAGTATGTAAAGG 624 Query 54946 GCCCGGCGATCGATGGCGGCGGCCGTCAGGTCATGGTCACGCCGGAGCCGTTCG--GC-T 55002 ||||||||| |||| | || ||| || || || || ||||| || || | Sbjct 625 TGCCGGCGATCTCGACCGGCCGACGCCAGATCCTG---ACCGCGAAGCCGACCGATGCGT 681 Query 55003 ACAAGGCGTACCAGAAGGCGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGCC 55062 |||| |||||| | |||||| |||||||| ||||| | ||| | | | Sbjct 682 TCAAGCGCTACCAGGTGCTGCTCGACGCGCGCATCAAGGCGATTGAGGAGCGCGACCGTC 741 Query 55063 CGCCGAAGAAGGGCGAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCCGCGA 55122 ||||| || |||||| || ||| | || || || |||||||||| | |||||| Sbjct 742 CGCCGGAGCCGGGCGACGATATCCTGCTCTCAGTCATTACGGACGGCCGCCACGCCGCGA 801 Query 55123 TCGACATGCGCTTCGTTGAC-CCGACCGCGCCGAGCGACCCGAACAGCAAGCTGAACCAG 55181 ||||| ||||| | || ||| | || || | | || ||| | | |||||| ||| || Sbjct 802 TCGACCTGCGCCTGGTCGACTCGGATAACGAC-AATGAGCCGGAGAACAAGCTCAACAAG 860 Query 55182 ATGATC 55187 ||||| Sbjct 861 CTGATC 866 >seq34219 Length=2018 Score = 123 bits (136), Expect = 1e-23 Identities = 280/416 (67%), Gaps = 4/416 (1%) Strand=Plus/Plus Query 53793 ACCGAGAAGGCCAACGACGTCGCT-CAGAAGATGCGCGCCGCGTTCAGCCGCTGGATTTG 53851 |||||| ||| || ||| ||| |||||||| | ||| ||| |||||||| || Sbjct 1579 ACCGAGGCGGCAAA-GACCAAGCTGCAGAAGATCAAGGACGCCTTCCAGCGCTGGATCTG 1637 Query 53852 GACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTTCAACAACAT 53911 | | ||| | | || |||||||||| | || ||||| ||||||||| || Sbjct 1638 GTCCGACCCTGATCGGACCGACCGGCTGGCGCGGGTGTATAACGATCGCTTCAACAATAT 1697 Query 53912 CGCCCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTGTCGCTGCGC-TTCG 53970 |||||| || ||||| || || || |||| ||| || |||| || |||| || | Sbjct 1698 CGCCCCACGAGCCTTCGATGGGTCTCATCTGAAGCTCCCTGGCGCCTCTG-GCGCCTTTG 1756 Query 53971 ACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGCGATATGTACC 54030 || | | |||||||||||| |||||||||| | | || || | || | Sbjct 1757 TTCTTTATGGGCACCAGAAGCGCGGCATCTGGCGCATCGTCTCGGCCGGTTCGACCTATC 1816 Query 54031 TCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACCGGCATGGAGGAGC 54090 |||| ||||| |||||||| |||||||| | || ||| || | | |||||| ||| Sbjct 1817 TCGCCCACGCCGTCGGCGCCGGCAAGACTATGACCATGGCGGCCGCGGTCATGGAACAGC 1876 Query 54091 GCCGGCTGGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATGCTGGCGCAAT 54150 |||| |||||| || | |||| | ||| || || || |||| |||||||| Sbjct 1877 GCCGACTGGGCTTGATCGCCAAGGCCATGCTCGTCGTTCCCGGCCACTGCCTGGCGCAGG 1936 Query 54151 TCGCGCGCGAGTTTCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCGGACGAG 54206 |||||||| ||||| | ||| || || ||| |||| | ||||| |||||| Sbjct 1937 CGGCGCGCGAATTTCTCGCGCTCTATCCCAACGCTCGCATCCTCGTCGCCGACGAG 1992 >seq29720 Length=2713 Score = 82.4 bits (90), Expect = 3e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 55530 CATCTGGACGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGT 55589 ||||| |||| ||||||| | ||| | ||||||| ||||| ||||||||| | || Sbjct 2592 CATCTCGACGTGCCGTGGCTTCCGTCGCAGATCGAGCAACGCGAAGGCCGCATCGTGCGA 2533 Query 55590 CAGGGCAACCAGAACAAGCAGGTGCGCATCCGCGCGTGGGCGACGAAGGGCAGCTACGAC 55649 |||||||||||| || | | || |||| ||| | ||||| | ||||| ||| Sbjct 2532 CAGGGCAACCAGCACGATGAAGTCGACATCTTCGCCTACGCGACCGAAGGCAGTCTCGAT 2473 Query 55650 TCGACCATGTGGGGGATGAACGCCCGCAAGGCCCGCTTCATCG 55692 || |||||| || |||| || ||||| |||||||||| Sbjct 2472 GCGCAGATGTGGCAGAACAACGAGCGGAAGGCGCGCTTCATCG 2430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200451382568820