Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4041 149 8e-31 seq553 131 2e-25 seq9829 123 3e-23 seq10792 93.3 5e-14 seq13217 82.4 9e-11 >seq4041 Length=27173 Score = 149 bits (164), Expect = 8e-31 Identities = 124/152 (82%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| |||||||||||||||||||| || || |||||| ||||| |||||||| || Sbjct 717 GTGGAGGCCCTCGTCACGGGAGATGAGCTCGTTTGAGAAGGTGAGACCCGGCATGAGGCC 658 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || || || || ||||| ||||||||||| ||||| || || Sbjct 657 GCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATTCCCTCGACGCA 598 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGC 127682 ||||| |||| || |||||||| || |||| Sbjct 597 GGCGAAAGCAACGAGGCGCTCGGCGAACGAGC 566 >seq553 Length=61157 Score = 131 bits (144), Expect = 2e-25 Identities = 129/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| || |||||||||||||||||||| || || |||||| ||||| Sbjct 7999 GCAAAGTCGCAGTGAAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCG 8058 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || |||||||| | |||||| || || || || ||||| ||||| || || Sbjct 8059 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAAAATATG 8118 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGA 127686 ||||| | || ||||| || | || |||||||| || |||| ||| Sbjct 8119 CCCTCGAAGCAGGCGAAGGCGACGAGTCGCTCGGCGAATGAGCCGGA 8165 >seq9829 Length=14110 Score = 123 bits (136), Expect = 3e-23 Identities = 143/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 || || || |||||||||||||| || || || |||||| || || ||||| || || Sbjct 4032 TGAAGGCCTTCGTCACGGGAGATAAGCTCGTTGGAGAAGGTGAGCCCCGGCATAAGGCCG 4091 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 |||||||| | ||| || || || || || ||||||||||||||||| ||||| | ||| Sbjct 4092 CGCTTCTTGAGCCAAAAGATAGCGCAGAAGGAGCCAGAGAAGAAGATTCCCTCGAAACAG 4151 Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 127711 ||||| || | || || ||||| ||||||| ||| || |||| ||| || ||| Sbjct 4152 GCGAAGGCGACAAGCCGTTCGGCGAAGGAGCCGGA---TGATTCAATCCAGCGCAGGGCC 4208 Query 127712 CACTGTGCCTTT 127723 || | |||||| Sbjct 4209 CAGTCGGCCTTT 4220 >seq10792 Length=12928 Score = 93.3 bits (102), Expect = 5e-14 Identities = 189/279 (68%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 12791 GAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATT--CGCG 12848 ||| ||||||||||| |||||||| ||||||||||| || || | ||||| || | | Sbjct 11974 GAACCCATCCATCTCTGTCAAGAGCTGATTGATGGTCTGCTCCCTCTCATCGTTGCCACC 12033 Query 12849 GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATA 12908 | || | || || | | ||| | || || || |||||||| || ||||| || || Sbjct 12034 GCCAAGC--CCGGCCCCTCTCTGCCTTCCCACCGCATCAATTTCATCTATGAACACAATG 12091 Query 12909 CACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCC 12968 |||||| || | || || || | ||| || || ||| || || || ||| Sbjct 12092 CACGGTGCCTTAGCCTTCGCCTTCTCGAACAAATCCCGGACCCTCGACGCCCCCACGCCC 12151 Query 12969 ACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCC 13028 || |||| |||||| || | || || | || || |||||| ||| || || ||| Sbjct 12152 ACGAACAGCTCCACGAACTCGGACGCCGCGCACGAGAAGAAGGGCACGCCGGCCTCTCCC 12211 Query 13029 GCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 13067 || | |||||||| || || || || || || || ||| Sbjct 12212 GCCACCGCTCGGGCCAGCAGCGTTTTGCCGGTGCCGGGT 12250 >seq13217 Length=10335 Score = 82.4 bits (90), Expect = 9e-11 Identities = 186/278 (67%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 12791 GAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATT--CGCG 12848 ||| ||||||||||| |||||||| |||||||| || || || | ||||| || ||| Sbjct 1102 GAACCCATCCATCTCCGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCGTTGCCGCC 1043 Query 12849 GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATA 12908 | || | || || | | ||| | || || || |||||||| || ||||| || || Sbjct 1042 GCCAAGC--CCAGCTCCTCTCTGCCTTCCCACCGCATCAATTTCATCGATGAAGACAATG 985 Query 12909 CACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCC 12968 |||||| || | || ||||| | ||| || || ||| || || || ||| Sbjct 984 CACGGTGCCTTAGCCTTTGCCTTCTCAAACAAATCCCGGACCCTCGACGCTCCCACTCCC 925 Query 12969 ACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCC 13028 ||||| | |||||| || | || || | ||| || ||| ||||| || || || Sbjct 924 ACAAATAGCTCCACGAACTCGGACGCTGCACACGAGAAGAACGGGACTCCGGCCTCTCCT 865 Query 13029 GCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066 || | || | || || || ||||| || || || || Sbjct 864 GCCACCGCCCTCGCCAGCAGCGTCTTGCCGGTACCCGG 827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613156388914200