Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq5201 87.8 1e-12 >seq5201 Length=23257 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 ||||| || | || || |||| || | ||| || || ||||| ||||| || || Sbjct 10609 CCGCCACGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGTATGTTATAGTCCGCA 10668 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| |||| |||| ||||||||| | || |||| | ||||| |||| || Sbjct 10669 AGAGTGCGGCCATCCTCCAGCTGTTTCCCGGCGAAGATTAGCCTTTGCTGGTCCGGCGGG 10728 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | || || ||||| || || ||| | | |||| || ||||| | ||| || | Sbjct 10729 ATCCCCTCCTTGTCCTGGATCTTAGCTTTCACGTTGTCGATA--GTGTCCGAGCTCTCTA 10786 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||| |||||| || || ||||||| || || |||||||||||||| Sbjct 10787 CCTCCAGAGTAATAGTCTTTCCCGTTAGGGTCTTCACGAAGATCTGCAT 10835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347175935477585