Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq6402 500 1e-136 seq18603 93.3 6e-14 >seq6402 Length=20154 Score = 500 bits (554), Expect = 1e-136 Identities = 691/967 (71%), Gaps = 0/967 (0%) Strand=Plus/Plus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 || || || ||| | ||| |||| ||||| ||||| | ||||| ||| | | | | Sbjct 18629 ACCGAAAACCGTCTTTACATTGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 18688 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || ||||| ||||| ||||| || ||||| || || || Sbjct 18689 GCAACTTCTGTATTTATTATTGCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATT 18748 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | || || ||| |||||||| || | || || || || || |||||||||||| || | Sbjct 18749 CGTGAACCTGTTTCTGGTTCTCTACTTTACGGAAATAATATTATCTCTGGTGCTATTATT 18808 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || || || ||||| || ||||| ||||||||||||||| | ||||| Sbjct 18809 CCTACTTCTGCAGCTATAGGTTTACATTTTTACCCAATCTGGGAAGCAGCATCTGTTGAT 18868 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 || ||| | ||||||||||| |||| | || || | | |||||| | |||| | Sbjct 18869 GAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGCGTA 18928 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | | |||||| | |||||||| Sbjct 18929 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATT 18988 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| ||| || || | | || || | Sbjct 18989 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTTTTGATCTACCCTATT 19048 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || ||||||||||| |||||| | ||||| ||||| || ||||||| ||| Sbjct 19049 GGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATG 19108 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| |||||||| || |||||||| || ||||| ||||| |||||||||||||| ||| Sbjct 19109 ATTGTATTCCAGGCGGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCT 19168 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| || || | ||| ||| ||||| ||||| | || || ||| | | Sbjct 19169 GGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTG 19228 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || ||||| | |||||| ||| ||||||| ||||| |||||||| Sbjct 19229 ATCAGGGAAACCACTGAAAACGAATCTGCTAACGCAGGTTACAGATTCGGTCAAGAGGAA 19288 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 || || || || ||||||||||| || ||||| ||||| || | ||||||||||| || Sbjct 19289 GAGACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 19348 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 ||| ||||| || | | | || |||||| | || || | ||||| ||| ||||| Sbjct 19349 AGTTTTAACAATTCTCGTTCTTTACATTTCTTCTTGGCTGCTTGGCCTGTAATTGGTATC 19408 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| ||||| | ||| | || ||||| |||||||| || |||||||| |||||| Sbjct 19409 TGGTTCACTGCTTTAGGTATTAGCACCATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 19468 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || || || || ||| ||| || ||| |||||||| || | | ||| | Sbjct 19469 CAATCCGTAGTTGACAGTCAGGGTCGTGTCATTAACACTTGGGCTGATATCATCAACCGT 19528 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||||||||| || ||||| |||||||||||||| | ||| | Sbjct 19529 GCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCACAACTTCCCTCTGGACCTA 19588 Query 216275 GCTGCTG 216281 ||||||| Sbjct 19589 GCTGCTG 19595 >seq18603 Length=6435 Score = 93.3 bits (102), Expect = 6e-14 Identities = 115/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 215710 TGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGG 215769 ||| || ||| | | ||||| | ||||| || ||| |||||| |||||| | || Sbjct 3451 TGCTGTTTTCTTGATCTATCCTATTGGTCAAGGACGCTTCCCTGATGGTATGCCTTTAGG 3392 Query 215770 AATCTCTGGAACATTCAACTACATGT-TTGTTTTCCAGGCTGAGCACAACATTCTGATGC 215828 ||| ||||| | ||||||| ||||| |||| || | ||| || |||||||| || |||| Sbjct 3391 AATATCTGGTAT-TTCAACTTCATGTATTGTATTTCTGGCAGAACACAACATCCTTATGC 3333 Query 215829 ACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTC 215863 | | | |||||||||||||| ||||||| ||| Sbjct 3332 ATCTGGTTCACATGTTAGGTGTAACTGGTGTATTC 3298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744655553027600