Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq6402 632 2e-176 seq18603 127 2e-24 >seq6402 Length=20154 Score = 632 bits (700), Expect = 2e-176 Identities = 732/984 (74%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || || |||| |||||||| || || |||||||| ||||| |||||||||||||| Sbjct 19590 GCTAGGTCCAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 19531 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 ||||| || | | ||| ||||| || || | ||||| || || || || | Sbjct 19530 GCACGGTTGATGATATCAGCCCAAGTGTTAATGACACGACCCTGACTGTCAACTACGGAT 19471 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| || || ||||| || || || ||||||||||||| ||| | ||||| ||| Sbjct 19470 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAGTGAAC 19411 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || |||| || ||||||||||||||||| || || | ||||||| |||||| || Sbjct 19410 CAGATACCAATTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAATTGTTAAAA 19351 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | || || || || || |||||||| || ||||||||||| Sbjct 19350 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTC 19291 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || ||||||||||| ||||||| ||| || | ||||| || ||||| | | Sbjct 19290 TCTTCCTCTTGACCGAATCTGTAACCTGCGTTAGCAGATTCGTTTTCAGTGGTTTCCCTG 19231 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | ||| || || | ||||||||||| ||| |||||| | || ||||||||| Sbjct 19230 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 19171 Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452 ||||| || || ||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct 19170 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCCTGGAATACA 19111 Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512 | ||| ||||||| || || || || || | ||||| |||||||||||| ||||| Sbjct 19110 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGA 19051 Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572 || | ||| || | | || ||||||| || |||||||| ||||| || || |||||| Sbjct 19050 CCAATAGGGTAGATCAAAAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 18991 Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632 ||||| ||||||||||| ||||| | ||||||||| ||||||||||||||| | Sbjct 18990 GCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAA 18931 Query 84633 AATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCAT 84692 | | |||| | |||||| | |||| || | |||||| |||||||| |||| ||| Sbjct 18930 GCTACGCCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAC 18871 Query 84693 TCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGAT 84752 || || | | |||||||||||| || || || ||||||| ||| ||||| ||| | Sbjct 18870 TCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCAGAAGTA 18811 Query 84753 GGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCA 84812 |||| | |||||||| || || || |||||||| | |||||||||| || || ||| Sbjct 18810 GGAATAATAGCACCAGAGATAATATTATTTCCGTAAAGTAGAGAACCAGAAACAGGTTCA 18751 Query 84813 CGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGT 84871 || ||||| |||||||| ||||| || ||| ||| ||| ||||| || || ||||| ||| Sbjct 18750 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCAATAATAAATACAGA-AGT 18692 Query 84872 GGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTT 84931 || | | || || || ||||| | | || ||||| |||| || | |||||| | Sbjct 18691 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCAATGTAAAGACGGTTTTC 18632 Query 84932 AGTGGAGGTGACCCAATCACAGAA 84955 ||| ||| | ||||| |||||| Sbjct 18631 GGTGCTGGTTATCCAATTACAGAA 18608 >seq18603 Length=6435 Score = 127 bits (140), Expect = 2e-24 Identities = 180/248 (73%), Gaps = 15/248 (6%) Strand=Plus/Plus Query 84386 GAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTG 84445 ||||||||||| || || |||||||||| |||||||||||||||| ||||| ||| | Sbjct 3298 GAATACACCAGTTACACCTAACATGTGAACCAGATGCATAAGGATGTTGTGTTCTGCCAG 3357 Query 84446 GAAGACAA-GCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAG 84504 || |||| |||| ||||||| | || || || || | ||||| ||||||| ||| Sbjct 3358 AAATACAATACATGAAGTTGAA-ATACCAGATATTCCTAAAGGCATACCATCAGGGAAGC 3416 Query 84505 AACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGT 84564 ||||| || | |||||| | | ||| |||||| |||||||| | ||| || | Sbjct 3417 GTCCTTGACCAATAGGATAGATCAAGAAAACAGCA------GCTGCAAC-GAAGCTGAAT 3469 Query 84565 AAGCAACACAGATCCATGGACGCATACCGAGACGATATGA---AAGTTCCCATTCACGAC 84621 | |||||| ||||| || ||||||| | |||| || |||||| | ||| ||| Sbjct 3470 ATGCAACAACAATCCAAAGATGCATACCCA---GATAGGAACTAAGTTCATACTCATGAC 3526 Query 84622 CCATGTAA 84629 | |||||| Sbjct 3527 CAATGTAA 3534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570946938614600