Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2268 105 8e-18 seq1774 105 8e-18 >seq2268 Length=36762 Score = 105 bits (116), Expect = 8e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||| | ||| | ||||||| || | || |||| |||||| ||||||||| Sbjct 24543 CCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATTGGAACAATACCA 24602 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 || ||| | ||||| || || |||||||| || | || | || || || ||| Sbjct 24603 TTAGATGTTCCATTTGTCCCACGGATATAACTGCCTGTTGCCCGGATGTTGTGAACAGAA 24662 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | ||| || || || || || ||||| ||||||| ||||| |||||||| || Sbjct 24663 ACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTAAGCGTATCATATATC 24722 Query 48540 CCTTCTATACTATCATCTATCAT 48562 || || || ||||||||| |||| Sbjct 24723 CCCTCAATGCTATCATCTTTCAT 24745 >seq1774 Length=40918 Score = 105 bits (116), Expect = 8e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||| | ||| | ||||||| || | || |||| ||| || ||||||||| Sbjct 29357 CCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATGGGAACAATACCA 29416 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 || ||| | ||||| || || ||||||||||| | || | || || || ||| Sbjct 29417 TTGGATGTTCCATTTGTGCCACGGATATAACTTCCTGTTGCACGGATGTTGTGAACAGAA 29476 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | ||| || || || || || ||||| ||||||| || || |||||||| ||| Sbjct 29477 ACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTCAGAGTATCATATATT 29536 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACT 48580 || || || ||||| ||| |||| || || |||||||| Sbjct 29537 CCCTCAATGCTATCTTCTTTCATGCATATGAGGAAACAACT 29577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561787379161800