Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq6402 571 2e-158 seq18603 136 1e-27 >seq6402 Length=20154 Score = 571 bits (632), Expect = 2e-158 Identities = 725/993 (73%), Gaps = 6/993 (1%) Strand=Plus/Minus Query 35968 CAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTA 36027 |||| |||||||| || ||||||||||| || ||||| |||||||| |||||||| || | Sbjct 19595 CAGCAGCTAGGTCCAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAA 19536 Query 36028 AGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGA 36087 || |||||||| | || ||||||||||| | ||| | || | ||||| | Sbjct 19535 GGTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATGACACGACCCTGACTGTCAACTA 19476 Query 36088 CTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGG 36147 | || || ||||| || || || || || || |||||||| ||| | || | ||| | Sbjct 19475 CGGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAG 19416 Query 36148 TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTAT 36207 | | ||| || | | | || ||||||||||||| ||||||||||||| || ||| | Sbjct 19415 TGAACCAGATACCAATTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAATTGT 19356 Query 36208 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 36267 |||| |||||||| |||||||| | || ||||| || |||||||| || || || |||| Sbjct 19355 TAAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTAT 19296 Query 36268 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 36327 | |||||||| ||||| |||||| | || || ||| |||||| |||| |||| Sbjct 19295 AAGTCTCTTCCTCTTGACCGAATCTGTAACCTGCGTTAGCAGATTCGTTTTCAGTGGTTT 19236 Query 36328 CACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCAC 36384 | | || || | |||| || |||| || ||||||||| ||||| | || | Sbjct 19235 CCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCGC 19179 Query 36385 CGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCT 36444 ||||||| || || ||||| | ||| || || |||||||||||||| |||||||| |||| Sbjct 19178 CGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCCT 19119 Query 36445 GAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAAC 36504 | || |||| |||||| |||||||| || || || || | |||||||||||||||||||| Sbjct 19118 GGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAAC 19059 Query 36505 TCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAAT 36564 | ||||| |||| |||||||| || || |||||| || ||||||||||| ||||||| Sbjct 19058 TTCCTTGACCAATAGGGTAGATCAAAAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAAT 18999 Query 36565 AAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA 36624 | || ||| ||||| || | |||||| || | ||||||||||||| | || |||| Sbjct 18998 ATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCA 18939 Query 36625 AGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTAT 36684 |||| | | |||| | ||||| | ||||| || | ||| || || || || | Sbjct 18938 TGTAACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGT 18879 Query 36685 ATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGT 36744 |||||||||| || | | ||| ||||||||||||||||| || || | ||| || || Sbjct 18878 ATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTG 18819 Query 36745 TCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGA 36804 || | || | || || |||||||| || || ||||| || |||| | || || | Sbjct 18818 CAGAAGTAGGAATAATAGCACCAGAGATAATATTATTTCCGTAAAGTAGAGAACCAGAAA 18759 Query 36805 CAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATG 36864 |||| |||||||||||||| ||||| || ||||| ||||||| || ||||| | |||| Sbjct 18758 CAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCAATAATAAATA 18699 Query 36865 CTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGC 36924 | | ||| || || | | ||||||||| | || || |||||||| | || || | Sbjct 18698 CAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCAATGTAAAGAC 18639 Query 36925 GGTTGTTTGTACTTGTAACCCAGTCACATAAAC 36957 |||| | || || || | ||| | ||| |||| Sbjct 18638 GGTTTTCGGTGCTGGTTATCCAATTACAGAAAC 18606 >seq18603 Length=6435 Score = 136 bits (150), Expect = 1e-27 Identities = 168/226 (74%), Gaps = 9/226 (4%) Strand=Plus/Plus Query 36386 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 36445 |||||| || | ||||| | ||| || | | ||||||||||||| |||||||||||| | Sbjct 3298 GAATACACCAGTTACACCTAACATGTGAACCAGATGCATAAGGATGTTGTGTTCTGCCAG 3357 Query 36446 AAAGACAA-ACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAAC 36504 ||| |||| |||| || |||||| | || || || || | |||||||||||||| ||| | Sbjct 3358 AAATACAATACATGAAGTTGAAA-TACCAGATATTCCTAAAGGCATACCATCAGGGAAGC 3416 Query 36505 TCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAAT 36564 ||||| |||| ||| |||| ||||| |||||| |||||||| | ||||||| Sbjct 3417 GTCCTTGACCAATAGGATAGATCAAGAAAACAGCA------GCTGCAAC-GAAGCTGAAT 3469 Query 36565 AAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTC 36610 | || ||| ||||| | |||||| || |||||||||| Sbjct 3470 ATGCAACAACAATCCAAAGATGCATACCCAGATAGGAACTAAGTTC 3515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150372669878730