Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq6402 600 4e-167 seq18603 123 8e-24 seq10775 82.4 2e-11 >seq6402 Length=20154 Score = 600 bits (664), Expect = 4e-167 Identities = 728/989 (74%), Gaps = 2/989 (0%) Strand=Plus/Minus Query 5190 CAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAA 5249 |||| ||||| || || ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 19595 CAGCAGCTAGGTCCAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAA 19536 Query 5250 GGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGA 5309 |||| |||||||| | || ||| ||||||||| || || | ||| | |||||| | Sbjct 19535 GGTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATGACACGACCCTGACTGTCAACTA 19476 Query 5310 CTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGG 5369 | || || ||||| || || || || || || |||||||| ||| || || | || | Sbjct 19475 CGGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAG 19416 Query 5370 TAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGT 5429 | | ||| || | || || ||||||| ||||| ||||||||||||| ||| ||||| Sbjct 19415 TGAACCAGATACCAATTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAATTGT 19356 Query 5430 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 5489 |||| |||||||| |||||||| | || ||||| || |||||||| || || || |||| Sbjct 19355 TAAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTAT 19296 Query 5490 ACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTT 5549 | || ||||||||||| |||||| | || || ||| ||| |||| |||| Sbjct 19295 AAGTCTCTTCCTCTTGACCGAATCTGTAACCTGCGTTAGCAGATTCGTTTTCAGTGGTTT 19236 Query 5550 CACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGA 5609 | | || | ||| || || | |||||||||||| ||| | | || |||| Sbjct 19235 CCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGA 19176 Query 5610 ATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGA 5669 |||| ||||| ||||| | |||||| || |||||||||||||| |||||||| ||||||| Sbjct 19175 ATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCCTGGA 19116 Query 5670 ATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTC 5729 |||| | ||||||||| ||||||||||| || || | ||||||||||||| |||||||| Sbjct 19115 ATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTC 19056 Query 5730 CCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATAT 5788 | || || | |||||| | ||||| || | ||||| | || ||||| || ||||||||| Sbjct 19055 CTTGACCAATAGGGTAGATCAAAAAAACAGCAGTAG-CAGCTGCAACAGGAGCTGAATAT 18997 Query 5789 GCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAG 5848 || || |||||| || ||||| || | | | ||||||||||||| | || |||| | Sbjct 18996 GCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATG 18937 Query 5849 TAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAA 5908 ||| || | |||| | |||||| | || | || | || || || |||||||| Sbjct 18936 TAACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTAT 18877 Query 5909 AGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTG 5968 | ||| ||||| | | |||||||||||||| || || || ||||| || || || Sbjct 18876 AACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCA 18817 Query 5969 GAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACG 6028 || | || | || || || || || || || ||||| || |||||||| || | || Sbjct 18816 GAAGTAGGAATAATAGCACCAGAGATAATATTATTTCCGTAAAGTAGAGAACCAGAAACA 18757 Query 6029 GGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCA 6088 |||||||| || || || || || ||||| || ||||| | ||| || | |||||| || Sbjct 18756 GGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCAATAATAAATACA 18697 Query 6089 GTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGG 6148 | ||||||||| || | | || ||||| || ||||| |||||||| | || || ||| Sbjct 18696 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCAATGTAAAGACGG 18637 Query 6149 TTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || | |||||| || | ||| | |||||| Sbjct 18636 TTTTCGGTGCTGGTTATCCAATTACAGAA 18608 >seq18603 Length=6435 Score = 123 bits (136), Expect = 8e-24 Identities = 166/226 (73%), Gaps = 9/226 (4%) Strand=Plus/Plus Query 5608 GAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 5667 |||||| |||| ||||| | |||||| | | ||||||||||||| |||||||||||| | Sbjct 3298 GAATACACCAGTTACACCTAACATGTGAACCAGATGCATAAGGATGTTGTGTTCTGCCAG 3357 Query 5668 GAATACGA-ACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAAC 5726 ||||| | |||| ||||| ||| ||||||| || || | ||||||||||||| ||| | Sbjct 3358 AAATACAATACATGAAGTTGAAA-TACCAGATATTCCTAAAGGCATACCATCAGGGAAGC 3416 Query 5727 TTCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAAT 5786 ||| || || | ||| || | || || || || | ||||| | || ||||||| Sbjct 3417 GTCCTTGACCAATAGGATAGATCAAGAAAAC--AGCA-GCTGC----AACGAAGCTGAAT 3469 Query 5787 ATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTC 5832 |||| || |||||| | |||| || | | |||||||||| Sbjct 3470 ATGCAACAACAATCCAAAGATGCATACCCAGATAGGAACTAAGTTC 3515 >seq10775 Length=12944 Score = 82.4 bits (90), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 5614 CCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATAC 5673 |||| | ||||| | ||||| || |||||||||||||| ||||| || |||| || ||| Sbjct 12209 CCCAACTACACCTAACATGTTCAATGGATGCATAAGGATGTTGTGCTCAGCCTAGAGTAC 12150 Query 5674 --GAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCC 5730 || | || || ||||||||| || || ||||||||||||||| | |||||| Sbjct 12149 AATAAGTTGAAAGTATCAGTACCAGATATTCCTAGAGGCATACCATCAGGAACACTTCC 12091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152566677398070