Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq6402 565 8e-157 seq18603 132 1e-26 >seq6402 Length=20154 Score = 565 bits (626), Expect = 8e-157 Identities = 721/988 (73%), Gaps = 6/988 (1%) Strand=Plus/Minus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| ||| |||||||||||||| || ||||| |||||||| |||||||| || | || Sbjct 19590 GCTAGGTCCAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 19531 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||| | || ||||||||||| | ||| | || | ||||| || || Sbjct 19530 GCACGGTTGATGATATCAGCCCAAGTGTTAATGACACGACCCTGACTGTCAACTACGGAT 19471 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || || || |||||||| ||| | || | ||| || | | Sbjct 19470 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAGTGAAC 19411 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || | | | || ||||||||||||| ||||||||||||| ||| ||| ||||| Sbjct 19410 CAGATACCAATTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAATTGTTAAAA 19351 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 |||||||| |||||||| | || ||||| || |||||||| || || || ||||| ||| Sbjct 19350 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTC 19291 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||| ||||| |||||| | || || ||| |||||| |||| ||||| | Sbjct 19290 TCTTCCTCTTGACCGAATCTGTAACCTGCGTTAGCAGATTCGTTTTCAGTGGTTTCCCTG 19231 Query 25813 AT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 25869 || || | |||| || |||| || ||||||||| ||||| | || |||||| Sbjct 19230 ATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCGCCGAAT 19174 Query 25870 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 25929 || || || ||||| | ||| || || |||||||||||||| |||||||| ||||| || Sbjct 19173 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCCTGGAAT 19114 Query 25930 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 25989 |||| |||||| |||||||| || || || || | ||||||||||||||||||||| ||| Sbjct 19113 ACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCT 19054 Query 25990 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 26049 || |||| |||||||| || || |||||| || ||||||||||| |||||||| || Sbjct 19053 TGACCAATAGGGTAGATCAAAAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 18994 Query 26050 ACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 26109 ||| ||||| || | ||| || || | ||||||||||||| | || |||| |||| Sbjct 18993 ACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAA 18934 Query 26110 GCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAAC 26169 | | ||| | | ||||| | ||||| || | ||| || ||||| || || ||| Sbjct 18933 CAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAAC 18874 Query 26170 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 26229 ||||| || | | ||| ||||||||||||||||| || || | ||| || || ||| Sbjct 18873 CACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCAGAA 18814 Query 26230 GACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGC 26289 | || | || || || ||||| || || ||||| || |||| | || || ||||| Sbjct 18813 GTAGGAATAATAGCACCAGAGATAATATTATTTCCGTAAAGTAGAGAACCAGAAACAGGT 18754 Query 26290 TCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTC 26349 |||||||||||||| ||||| || ||||| ||||||| || ||||| | |||| | | Sbjct 18753 TCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCAATAATAAATACAGAA 18694 Query 26350 ACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTG 26409 ||| || || | | ||||||||| | || || |||||||| | || || ||||| Sbjct 18693 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCAATGTAAAGACGGTTT 18634 Query 26410 TTTGTACTTGTAACCCAGTCACATAAAC 26437 | || || || | ||| | ||| |||| Sbjct 18633 TCGGTGCTGGTTATCCAATTACAGAAAC 18606 >seq18603 Length=6435 Score = 132 bits (146), Expect = 1e-26 Identities = 149/196 (76%), Gaps = 9/196 (5%) Strand=Plus/Plus Query 25866 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 25925 |||||| || | ||||| | ||| || | | ||||||||||||| |||||||||||| | Sbjct 3298 GAATACACCAGTTACACCTAACATGTGAACCAGATGCATAAGGATGTTGTGTTCTGCCAG 3357 Query 25926 AAAGACAA-ACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAAC 25984 ||| |||| |||| || |||||| | || || || || | |||||||||||||| ||| | Sbjct 3358 AAATACAATACATGAAGTTGAAA-TACCAGATATTCCTAAAGGCATACCATCAGGGAAGC 3416 Query 25985 TCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAAT 26044 ||||| |||| ||| |||| ||||| |||||| |||||||| | ||||||| Sbjct 3417 GTCCTTGACCAATAGGATAGATCAAGAAAACAGCA------GCTGCAAC-GAAGCTGAAT 3469 Query 26045 AAGCTACACATATCCA 26060 | || ||| ||||| Sbjct 3470 ATGCAACAACAATCCA 3485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151911033751620