Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq32070 109 4e-19 seq12074 109 4e-19 seq1503 96.9 3e-15 seq5201 89.7 4e-13 seq1389 86.0 5e-12 seq2239 82.4 6e-11 >seq32070 Length=2310 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| || || ||||| |||||||| | || | || Sbjct 1128 AGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGG 1069 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| |||||| || ||||| || || | ||| ||||||| |||| |||||| Sbjct 1068 CCGTCCTCCAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCCGGTGGAATCCCCTCC 1009 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || |||| | | | | || || ||||||||||| |||| Sbjct 1008 TTGTCTTGGATCTTTGCCTTGACAGTATCGATCGTGTCCGAGCTCTCCACCTCCAACGTA 949 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || || ||||| |||||||| Sbjct 948 ATGGTCTTCCCCGTGAGGGTCTTAACAAAGATCTGCAT 911 >seq12074 Length=11460 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| || || ||||| |||||||| | || | || Sbjct 3675 AGGCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGGGTGCGG 3616 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| |||||| || ||||| ||||| | ||| ||||||| |||| |||||| Sbjct 3615 CCGTCCTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGAATCCCCTCC 3556 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | | | || || ||||||||||| |||| Sbjct 3555 TTGTCCTGGATCTTTGCCTTGACATTATCGATCGTGTCCGAGCTCTCCACCTCCAACGTA 3496 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || || ||||| |||||||| Sbjct 3495 ATGGTCTTCCCCGTGAGGGTCTTAACAAAGATCTGCAT 3458 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || | || ||| | || || ||| || || ||||| |||||||| | Sbjct 3457 GCCTCCCCTAAGTCTCAGCACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGC 3398 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || || | |||||| |||||||| || || | ||| || |||| ||| Sbjct 3397 CAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGG 3338 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | ||||||||||| |||||| || ||| | | | || || |||||| Sbjct 3337 GATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCCGAGCTCTCCAC 3278 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | || || || || || |||||||| || || || || ||||| Sbjct 3277 CTCAAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAGATTTGCAT 3230 >seq1503 Length=43560 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 ||||||| | || || | ||||| || || ||| ||| || || || || || || | Sbjct 30437 CGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGG 30496 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 ||| | || |||| |||| |||||| || || || || || ||||| || |||| | Sbjct 30497 CGAGAGTGCGGCCGTCCTCCAGCTGCTTCCCTGCGAAGATGAGGCGCTGCTGGTCCGGCG 30556 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || || | | | || |||| ||||| Sbjct 30557 GGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCCA 30616 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 |||| | || ||||| || |||||||| || || || || ||||||||| || Sbjct 30617 CCTCAAGGGTGATCGTCTTCCCCGTCAACGTCTTCACGAAGATCTGCATCCTG 30669 >seq5201 Length=23257 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| || ||||| || ||||| ||| || || || |||||||||| Sbjct 10837 CCTCCCCTCAGCCTCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCAGCA 10896 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || |||| || | |||||| || || || || || | ||| || |||| || Sbjct 10897 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATGAGCCTCTGCTGGTCCGGCGGG 10956 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| ||| || | | | || || ||||||| Sbjct 10957 ATCCCCTCCTTGTCCTGGATCTTAGCTTTCACGTTGTCTATGGTGTCCGAGCTCTCCACC 11016 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || ||||| | || || || || |||||||| Sbjct 11017 TCCAAGGTAATGGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 11063 >seq1389 Length=44750 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||||||||| ||| |||||| ||| || || || |||||||| | Sbjct 22559 CCTCCCCTGAGTCGCAACACCAGATGGAGCGTGGACTCCTTCTGTATGTTGTAATCGGCA 22618 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || |||| || | ||| || || ||||| || || | || || |||| || Sbjct 22619 AGAGTGCGGCCGTCTTCGAGCTGTTTTCCTGCAAAGATGAGCCTTTGCTGGTCCGGCGGG 22678 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| || ||| | | | || || ||| ||| Sbjct 22679 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGCTCTCGACC 22738 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || || || | ||| || || || || ||||| Sbjct 22739 TCCAAGGTAATGGTCTTCCCAGTGAGAGTCTTCACGAATATTTGCAT 22785 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || || | ||||| || || ||| || || || || ||||| || | Sbjct 22330 GCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCCGC 22389 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| || | |||||| ||||| || || || | ||| || |||| || Sbjct 22390 CAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGG 22449 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| ||||| || || | | | ||||| |||||| Sbjct 22450 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCAC 22509 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||| || ||||| || || || | |||||| ||||| ||||||||| Sbjct 22510 CTCCAGTGTGATCGTCTTCCCGGTGAGAGTTTTGACAAATATCTGCATC 22558 >seq2239 Length=36943 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| ||| || || || |||||||| | ||| | ||| Sbjct 31196 AGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCTAGGGTGCGA 31255 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || ||||| || || | ||| || |||| |||| |||||| Sbjct 31256 CCGTCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGAATACCCTCC 31315 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || || ||| ||||||| || Sbjct 31316 TTGTCCTGGATCTTTGCCTTAACGTTGTCGATCGTGTCAGAGCTCTCAACCTCCAGGGTG 31375 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | ||| || ||||| |||||||| Sbjct 31376 ATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 31413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380725220740635