Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq6402 623 1e-173 seq18603 111 2e-19 >seq6402 Length=20154 Score = 623 bits (690), Expect = 1e-173 Identities = 708/948 (75%), Gaps = 4/948 (0%) Strand=Plus/Plus Query 162541 GGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATT 162600 || ||||||||||| |||||||||||| ||| | | ||| | || || || ||| Sbjct 18650 GGGTGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATT 18709 Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 || |||||||| || |||||||| ||||| |||||||| | ||||||||| | ||||| Sbjct 18710 GCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGTTCT 18769 Query 162661 CTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGT 162720 || || || || || || || |||||||||||| | |||||| ||| ||||| ||| Sbjct 18770 CTACTTTACGGAAATAATATTATCTCTGGTGCTATTATTCCTACTTCTGCAGCTATAGGT 18829 Query 162721 CTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGA 162780 | || || || || ||||||||||||||| || ||||||||||||| || |||||||| Sbjct 18830 TTACATTTTTACCCAATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGTGGT 18889 Query 162781 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAG 162840 |||| | || | || | |||||| | | || | | ||| |||||| || Sbjct 18890 CCTTATGAGCTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAG 18949 Query 162841 TGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 162900 ||||||||| || ||| | ||||||||||||||||| ||||||||| || || || Sbjct 18950 TGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCT 19009 Query 162901 GTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGAC 162960 || | || || ||||| || ||| |||| ||| | |||||||| ||||||||| Sbjct 19010 GTTGCAGCTGCTACTGCTGTTTTTTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGAT 19069 Query 162961 GCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCAC 163020 | |||||| | || || ||||||||||| |||| ||| | || ||||| || || ||| Sbjct 19070 GGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAACAC 19129 Query 163021 AACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTC 163080 |||||||| ||||| || || || ||| | || || || ||||||||||| || || || Sbjct 19130 AACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTA 19189 Query 163081 TTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAA 163140 || ||||||||||| ||||| | || || ||| | | ||||| ||||| ||||| | Sbjct 19190 TTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAAC 19249 Query 163141 GAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCT 163200 || || ||| ||||| | ||||| ||||| ||||||||||| || || || ||| Sbjct 19250 GAATCTGCTAACGCAGGTTACAGATTCGGTCAAGAGGAAGAGACTTATAATATCGTAGCT 19309 Query 163201 GCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCA 163260 |||||||| || ||||| || ||||||||||| ||||| ||| ||||| || ||||| Sbjct 19310 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTTAACAATTCTCGTTCT 19369 Query 163261 CTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTG 163320 | || |||||| | ||||| | ||||| | | |||||||||||||| | ||| | Sbjct 19370 TTACATTTCTTCTTGGCTGCTTGGCCTGTAATTGGTATCTGGTTCACTGCTTTAGGTATT 19429 Query 163321 TCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGAC--GCAG 163378 || ||||| |||||||| || |||||||| |||||||||||||| |||||| ||| Sbjct 19430 AGCACCATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGACAGTCAG 19489 Query 163379 GTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAG 163438 ||| || ||| |||||||| |||||| | ||| | || ||||||||||||| Sbjct 19490 --GGTCGTGTCATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAG 19547 Query 163439 TTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 163486 | ||||| || |||||||||||||||||||| || ||||| ||||||| Sbjct 19548 TAATGCATGAACGTAATGCTCACAACTTCCCTCTGGACCTAGCTGCTG 19595 >seq18603 Length=6435 Score = 111 bits (122), Expect = 2e-19 Identities = 171/239 (72%), Gaps = 9/239 (4%) Strand=Plus/Minus Query 162831 TGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATA 162890 ||||| | ||| |||||| || | | ||||||| || |||||| ||||||||| Sbjct 3528 TGGTCATGAGTATGAACTTAGTTCCTATCTGGGTATGCATCTTTGGATTGTTGTTGCATA 3469 Query 162891 CTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTC 162950 || || | || |||||| ||||| |||||| |||||||| | |||||||| Sbjct 3468 TTCAGCTTC-GT---TGCAGCT---GCTGTTTTCTTGATCTATCCTATTGGTCAAGGACG 3416 Query 162951 TTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGT-TCGTGTTCC 163009 ||| |||| | |||||| | || || ||||||| ||| |||| ||||| | || || | Sbjct 3415 CTTCCCTGATGGTATGCCTTTAGGAATATCTGGTA-TTTCAACTTCATGTATTGTATTTC 3357 Query 163010 AAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTC 163068 ||||| ||||||||||| ||||| | | || ||| | || || | ||||||||| Sbjct 3356 TGGCAGAACACAACATCCTTATGCATCTGGTTCACATGTTAGGTGTAACTGGTGTATTC 3298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552768539197800