Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq553 152 1e-31 seq4041 136 7e-27 seq9829 129 1e-24 seq24876 91.5 3e-13 >seq553 Length=61157 Score = 152 bits (168), Expect = 1e-31 Identities = 423/640 (66%), Gaps = 22/640 (3%) Strand=Plus/Minus Query 25690 TTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT- 25748 ||||||||||||||||| || ||||| || | ||||| ||| |||| || || || Sbjct 8333 TTCTACGGTTTCCAGATTGCAATCGAGAACATCCACTCCGAGATGTACTCCCTTCTACTC 8274 Query 25749 GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACAT 25808 ||| || ||||| | ||| | |||| ||| || || |||||||| ||| Sbjct 8273 GAT-ACCTACATCAAGGACCCCAATGAGAAGTCTCGCCTCTTCCACGCCATCGA-CACCG 8216 Query 25809 ACCCAGCA-TCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAA--CAGCCAGAGCGC 25865 ||| || || ||||||| |||||| | ||||| | | || | | Sbjct 8215 TCCCTGCGGTCGCTCGGAAGGCCGACTGGGCCCTCCGATGGATTGATTCTTCCGG----C 8160 Query 25866 TACGTTTGGCGAGCGGCTGGTAGCCTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTT 25924 | | || | |||||| || || ||||| || |||| | |||||||| |||||| ||| | Sbjct 8159 T-CATTCGCCGAGCGACTCGTCGCCTTCGCCTGCT-TCGAGGGCATATTTTTCTCCGGCT 8102 Query 25925 CGTT-TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCC 25983 | || |||| ||||||||||||||||| || || ||||||||| || ||| ||| Sbjct 8101 CCTTCTGCG-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTCACCTTCTCC 8043 Query 25984 AACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 |||||||||||| | | |||||||| || ||| | || ||||||||||| || ||| Sbjct 8042 AACGAGCTCATCTCCCGTGACGAGGGCCTTCACTGCGACTTTGCCTGCCTCCTTTAC--- 7986 Query 26044 GGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTG 26103 |||| | | | | |||| | ||| | || | ||| |||| | || || || Sbjct 7985 GGCCTCCTCCGCAACAAGCTCTCTGAGGACAAGGTCCGGGCTATCGTTGCCGACGCCGTT 7926 Query 26104 GAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAAC 26163 || |||||| |||||| | || ||||| Sbjct 7925 GATATCGAGCGGGAGTTCGTCTGCGACGCCCTGCCCGTCGCGCTCGTCGGGATGAATGGT 7866 Query 26164 AGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGG--AC 26221 || |||||||| ||||| |||| ||||||||||| ||||| | |||||| || Sbjct 7865 GCCCTGATGAGCCAGTACATCGAGTTTGTGGCCGACCGCCTGCTCGGGGCGCTGGGCTAC 7806 Query 26222 TCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAG 26281 ||| ||| | ||| | | ||||| ||||||| |||||| ||| || || | | Sbjct 7805 -CGCAAGA-TGTACGGGGTCTCCAACCCATTCGACTGGATGGAACTCATCTCTCTGCAGG 7748 Query 26282 GGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||||||||| || || |||||||| || || || Sbjct 7747 GGAAGACCAACTTCTTCGAGAAAAGGGTCGGTGAGTACCA 7708 >seq4041 Length=27173 Score = 136 bits (150), Expect = 7e-27 Identities = 248/354 (70%), Gaps = 7/354 (2%) Strand=Plus/Plus Query 25690 TTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTG 25749 |||||||| |||||||| |||||||| || | ||||||||| ||||| | || || Sbjct 394 TTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCTGAGATGTATTCTCTCCTCCTC 453 Query 25750 ATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATA 25809 || ||||| | ||| || ||||| || || || |||||||||| ||| Sbjct 454 GACACCTACATCAAGGACCCCGACGAGAAGTCCCGCCTCTTCCGTGCCATCGACACCATC 513 Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 || || | ||||| |||||| | |||||| | | || | ||| || Sbjct 514 CCTCCTGTCGCCCGCAAGGCCGAGTGGGCGCTACGCTGGATCGA-ATCCTCTG-GCT-CG 570 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGC-TGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928 || | |||||| || || || || || ||| || ||||| ||||| ||| ||| || || Sbjct 571 TTCGCCGAGCGCCTCGTTGCTTTCGCCTGC-GTCGAGGGAATCTTCTTCTCCGGCTCCTT 629 Query 25929 -TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACG 25987 |||| ||||||||||||||||| || || |||||| || || ||| || |||| Sbjct 630 CTGCG-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCGGGTCTCACCTTCTCAAACG 688 Query 25988 AGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||||||| | | |||||||| |||||| | || || |||||||| ||||||| Sbjct 689 AGCTCATCTCCCGTGACGAGGGCCTCCACTGCGACTTCGCCTGCCTTCTCTACA 742 >seq9829 Length=14110 Score = 129 bits (142), Expect = 1e-24 Identities = 548/857 (64%), Gaps = 27/857 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||| | ||||||||||| ||| |||||| || || ||| | |||||| Sbjct 4570 ATCTGGGAGTTCTACAAGAAGGCGGTGGCCTCCTTCTGGACGGCGGAGGAGGTGGATCTG 4511 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 | |||| || | ||| | ||| || ||| | ||||||| || || || Sbjct 4510 TCGCCGGACGTGCCCCAGTGGCAGCATCGC-CTCTCCCACGACGAGCGCCACTTCATCTC 4452 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || ||||| || || || || ||||| || || | Sbjct 4451 CCACGTTCTTGCCTTCTTCGCCGCCTCAGACGGCATCGTCCTTGAGAACCTCGCCGCCCG 4392 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| | || || ||| | ||||| |||||||| |||||||| ||||| Sbjct 4391 GTTCATGCGCGACGTTCAGCTCCCCGAGGCTCGCGCCTTCTACGGCTTCCAGATCGCCAT 4332 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGC 25772 ||| || | ||||| ||| |||| || || || || ||||| | ||| | Sbjct 4331 CGAGAACATTCACTCGGAGATGTACTCCCTCCTCCTCGACACCTACATCAAGGACCCTGA 4272 Query 25773 CGAGAGAGATCGG-CTGTTTGGTGCCATCGAGCACA-TACCCAGCATCAAGAGGAAGGCG 25830 ||||| ||| | | || || ||||||||| ||| | ||| | || | ||||| Sbjct 4271 CGAGA-AGACCCGTCTCTTCCATGCCATCGA-CACGGTCCCCTCCGTCTCCCGAAAGGCC 4214 Query 25831 CGGTGGGCCATGAAGTGGATCAA--CAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 |||||| || ||||| | || || | || | || | ||| ||||| || | Sbjct 4213 GACTGGGCCCTGCGCTGGATTGAATCATCCGG----CTCC-TTCGCCGAACGGCTTGTCG 4159 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTC 25947 |||| || | | ||||| ||||| ||| || || || |||| | ||||| |||||| Sbjct 4158 CCTTCGCCTGTTTCGAGGGAATCTTCTTCTCTGGCTCCTTCTGCG-CTATCTTTTGGCTC 4100 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || ||||| ||||| ||| ||||||||||| ||| | | ||||| Sbjct 4099 AAGAAGCGCGGCCTTATGCCGGGGCTCACCTTCTCCAACGAGCTTATCTCCCGTGACGAA 4040 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || || || | || || |||||||| ||||||| ||| | | | | |||| | | | Sbjct 4039 GGCCTTCATTGCGACTTCGCCTGCCTCCTCTACA---GCCTCCTCCGCAACAAGC--TGT 3985 Query 26068 CAAGAGACCGTCTACAG--TATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 | |||||| | | | ||| | || ||||| || |||||| ||||||| Sbjct 3984 CGGAGGACCGTGTCCGGGCCATCGTTGCCGACGCTGTTGACATCGAGCGGGAGTTTGTTT 3925 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185 | || |||||| | || |||||||| ||||| | Sbjct 3924 GTGACTCCCTTCCCGTAGCGCTCGTCGGGATGAACGGCGACCTTATGAGCCAGTACATAG 3865 Query 26186 AGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244 ||| |||||| |||| |||| |||| || ||||| | || | | | | | Sbjct 3864 AGTTTGTGGCTGACCGCCTGCTTGTGTCA-CTGGGTCACGGTAAGATGTTTGGGGTGGTG 3806 Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||| ||||||| ||||| ||| ||| || | ||||||||||||||||| |||||| Sbjct 3805 AACCCCTTCGACTGGATGGAGCTCATCTCGCTGCAGGGGAAGACCAACTTCTTCGAAAAG 3746 Query 26305 AGGGTCGGCGACTATCA 26321 ||||| || || || || Sbjct 3745 AGGGTTGGAGATTACCA 3729 >seq24876 Length=3860 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26167 CTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCC 26226 ||||||||||| ||||| |||| |||||||||| ||||| | ||| || || | Sbjct 1136 CTCATGAGCCAGTACATCGAGTTCGTGGCCGACCGCCTGCTCAGGGCGCTAGGCTACGGC 1077 Query 26227 AGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAG 26286 | | ||||| || | ||||| ||||||| ||||| ||| || | | |||||| Sbjct 1076 AAGATGTACAGGGCGGCCAACCCCTTCGACTGGATGGAGCTCATCTCACCGCAGGGGAAG 1017 Query 26287 ACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||| || |||||||| ||||| || || Sbjct 1016 GCCAACTTCTTCGAGAAGAGGGTGGGCGAGTACCA 982 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/140 (76%), Gaps = 5/140 (4%) Strand=Plus/Minus Query 25905 GGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-C 25962 ||||||||| |||| || || || |||| | ||||||||||||||| | | | || | | Sbjct 1384 GGGCATCTTCTTCACCGACTCCTTCTGCG-CTATCTTCTGGCTCAAG-AAACGTGGCCTC 1327 Query 25963 ATGCCCGGGCTGTACTTTTCCAACGAGCTCA-TCAGCAGGGACGAGGGTCTCCACAGAGA 26021 |||||||| || ||| |||||| | ||| || | | |||||||| |||||| | || Sbjct 1326 ATGCCCGGCCTCACCTTCTCCAACAAATTCATTCTTCTGCGACGAGGGCCTCCACTGTGA 1267 Query 26022 TTTTGCCTGCCTGCTCTACA 26041 || |||||||| ||||||| Sbjct 1266 CTTCGCCTGCCTCCTCTACA 1247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928313674932800