Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq44304 114 5e-21 seq34219 114 5e-21 seq29720 86.0 3e-12 >seq44304 Length=1085 Score = 114 bits (126), Expect = 5e-21 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 54863 CACGAGTTCCGCAAACTCGACTTCGCGACGCAGCAGGGCAACATC-AAGGGCATCGACCC 54921 || |||||| | || ||| |||||| || || || | | || | ||||| || ||||| Sbjct 210 CAGGAGTTCAGGAAGCTCTCCTTCGCCAC-CAACATGTCGACGTTGAAGGGGATAGACCC 268 Query 54922 GGCCGGCTCGCAACGCGCGATGGACCTGTTCATGAAGGCGCAGTACCTGCGCTCGAAGAA 54981 ||||||||| ||||| |||||| | ||||| ||| | | | | |||| || Sbjct 269 CAACGGCTCGCAGCGCGCCTGGGACCTCTATGTGAAGTCGCGCTTCGTCCAAACGAAAAA 328 Query 54982 GCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCCGATCACGAACACGATGGGCGAGCT 55041 || ||||| ||||||||| ||| || |||||||||||||| |||||| | |||||| | Sbjct 329 CCCAGGCCGGGCGCTCGTCCTCGCCTCCGGCACGCCGATCACCAACACGCTTGGCGAGAT 388 Query 55042 GTTCACGGTGCAACGCT 55058 |||| | ||||| |||| Sbjct 389 GTTCTCCGTGCAGCGCT 405 >seq34219 Length=2018 Score = 114 bits (126), Expect = 5e-21 Identities = 262/392 (67%), Gaps = 2/392 (1%) Strand=Plus/Plus Query 54148 GCAGAAGATGCGCGCCGCGTTCAGCCGCTGGATTTGGACGGACACGAAGCGCGCCGACCG 54207 ||||||||| | ||| ||| |||||||| ||| | ||| | | || ||||||| Sbjct 1602 GCAGAAGATCAAGGACGCCTTCCAGCGCTGGATCTGGTCCGACCCTGATCGGACCGACCG 1661 Query 54208 GCTCGTCAACTACTACAACGAGAACTTCAACAACATCGCCCCGCGCCAGTTCGACGGCTC 54267 ||| | || ||||| ||||||||| |||||||| || ||||| || || Sbjct 1662 GCTGGCGCGGGTGTATAACGATCGCTTCAACAATATCGCCCCACGAGCCTTCGATGGGTC 1721 Query 54268 GCACCTGACGCTGCCGGGCGTGTCGCTGCGC-TTCGACCTGCGCGAGAACCAGAAGCGCG 54326 || |||| ||| || |||| || |||| || | || | | |||||||||||| Sbjct 1722 TCATCTGAAGCTCCCTGGCGCCTCTG-GCGCCTTTGTTCTTTATGGGCACCAGAAGCGCG 1780 Query 54327 CCATCTGGCGCGGCATTCAGGAAGGCGATATGTACCTCGCGCACGCTGTCGGCGCGGGCA 54386 |||||||||| | | || || | || ||||| ||||| |||||||| |||| Sbjct 1781 GCATCTGGCGCATCGTCTCGGCCGGTTCGACCTATCTCGCCCACGCCGTCGGCGCCGGCA 1840 Query 54387 AGACGTTCACGATGATCGCGACCGGCATGGAGGAGCGCCGGCTGGGCCTGTCCAACAAGC 54446 |||| | || ||| || | | |||||| ||||||| |||||| || | |||| Sbjct 1841 AGACTATGACCATGGCGGCCGCGGTCATGGAACAGCGCCGACTGGGCTTGATCGCCAAGG 1900 Query 54447 CGATGTATGCGGTGCCGAACCACATGCTCGCGCAGTTCGCGCGCGAGTTCCTTGAGCTGT 54506 | ||| | || || |||| || |||||| |||||||| || || | ||| | Sbjct 1901 CCATGCTCGTCGTTCCCGGCCACTGCCTGGCGCAGGCGGCGCGCGAATTTCTCGCGCTCT 1960 Query 54507 ACCCGGCCGCGAACATCATGGTCGCGGACGAG 54538 | || ||| |||| | ||||| |||||| Sbjct 1961 ATCCCAACGCTCGCATCCTCGTCGCCGACGAG 1992 >seq29720 Length=2713 Score = 86.0 bits (94), Expect = 3e-12 Identities = 242/364 (66%), Gaps = 16/364 (4%) Strand=Plus/Minus Query 55862 CATCTGGACGCGCCGTGGTTCCCGGCGTCCGTCGAGCAGCGCGAGGGGCGCATCATCCGC 55921 ||||| |||| ||||||| | ||| || ||||||| ||||| || |||||| | || Sbjct 2592 CATCTCGACGTGCCGTGGCTTCCGTCGCAGATCGAGCAACGCGAAGGCCGCATCGTGCGA 2533 Query 55922 CAGGGCAACCAGAACAAGCAGGTGCGCATCCGCGCGTGGGCGACGAAGGGCAGCTACGA- 55980 |||||||||||| || | | || |||| ||| | ||||| | ||||| ||| Sbjct 2532 CAGGGCAACCAGCACGATGAAGTCGACATCTTCGCCTACGCGACCGAAGGCAGTCTCGAT 2473 Query 55981 CAGCACGATGTGGGGGATGAACGCCCGCAAGGCGCGGTTCATCGAACAGGCCCTCAACGG 56040 ||| ||||||| || |||| || |||||||| ||||||| || | ||| Sbjct 2472 GCGCA-GATGTGGCAGAACAACGAGCGGAAGGCGCGCTTCATCGCGGCCGCATTGTCCGG 2414 Query 56041 CGACGACAGCG-TGCGCTCGCTCGAGGACGTGTCTGAAGCGTCGGC------GTTCGACA 56093 |||| || || | || ||| ||||| || ||| | ||| ||||| || Sbjct 2413 CGAC-ACCTCGATCCGTCGGCTAGAGGATATGGGCGAAACCCAGGCGAACCAGTTCGCCA 2355 Query 56094 TGGCCGCCGCGCTGGCGTCGGGCGA--CGAGCGCTAT-CTGAAGATGGCCGGCCTGAAGG 56150 ||||| || | || ||||| || |||| || ||||| ||| || || ||| Sbjct 2354 TGGCCAAGGCAATCGCCTCGGGGGATCCGAGACTGATGCTGAA---GGCGGGTCTCGAGG 2298 Query 56151 CCGACGTCGAGCGCCTGGAGCGTCTGAGCTACGCGCACCACGACGACCAGAACAAGCTCC 56210 ||||| ||| ||| || || ||||| || ||| || ||||| |||| || | ||| Sbjct 2297 CCGACATCGCGCGGCTCGAACGTCTCCGCGCCGCCCATATCGACGGCCAGCACGCGATCC 2238 Query 56211 GGCG 56214 | || Sbjct 2237 GACG 2234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201209359747785