Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq6402 571 2e-158 seq18603 118 3e-22 >seq6402 Length=20154 Score = 571 bits (632), Expect = 2e-158 Identities = 727/991 (73%), Gaps = 10/991 (1%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| || || |||||||| ||||||||||| || ||||| ||||| | |||||||| Sbjct 19591 AGCTAGGTCCAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTT 19532 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTG-CTACAATGG 17952 ||| | ||||| | |||||||| || | ||| | || | ||| | || | || Sbjct 19531 AGCACGGTTGATGATATCAGCCCAAGTGTTAATGACACGACCCTGA-CTGTCAACTACGG 19473 Query 17953 ATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAA 18012 |||||||||| ||||| ||||| || || |||||||| ||| || || | || || | Sbjct 19472 ATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAGTGA 19413 Query 18013 GCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAA 18072 ||| || | | | || ||||||||||||||||||||||||| | | |||||||| Sbjct 19412 ACCAGATACCAATTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAATTGTTAA 19353 Query 18073 AGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACG 18132 | |||||||| |||||||| | || ||||| || |||||||| || || |||||||| | Sbjct 19352 AACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAG 19293 Query 18133 TCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTC 18192 ||||||| ||||| || ||| | || || ||| ||| || ||||| ||||| | Sbjct 19292 TCTCTTCCTCTTGACCGAATCTGTAACCTGCGTTAGCAGATTCGTTTTCAGTGGTTTCCC 19233 Query 18193 TAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 18249 | || || | |||| || |||| || ||||||||| ||||| | || |||| Sbjct 19232 TGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCGCCGA 19176 Query 18250 ATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGA 18309 |||| || || ||||| | ||| || || |||||||||||||| |||||||| || |||| Sbjct 19175 ATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCCTGGA 19116 Query 18310 ATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCC 18369 |||| | ||| || ||||||||||| || || | ||||||||||||||||||||| | Sbjct 19115 ATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTC 19056 Query 18370 CTTGTCCAAAAGGATAAACGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAA 18428 |||| |||| ||| || | | ||| || | || || ||||||| || || || ||||| Sbjct 19055 CTTGACCAATAGGGTAGATCAAAAAAACAGCAGTAG-CAGCTGCAACAGGAGCTGAATAT 18997 Query 18429 GCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATG 18488 |||||| |||||| || |||||||| || | ||||||||||||| | || |||||| Sbjct 18996 GCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATG 18937 Query 18489 TAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATAT 18548 ||| || | ||| | | ||||| | ||||| || | ||| || || || || ||| Sbjct 18936 TAACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTAT 18877 Query 18549 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTA 18608 |||||||| || | | ||| ||||||||||||||||| || || | ||| || || | Sbjct 18876 AACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCA 18817 Query 18609 GATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACA 18668 || | || | || || || || || || || ||||| || |||| | || || ||| Sbjct 18816 GAAGTAGGAATAATAGCACCAGAGATAATATTATTTCCGTAAAGTAGAGAACCAGAAACA 18757 Query 18669 GGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCT 18728 || |||||||||||||| || || || ||||||||||||| || ||||| | |||| | Sbjct 18756 GGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCAATAATAAATACA 18697 Query 18729 GTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGG 18788 | || |||||| || | | ||||||||| | || || |||||||| | ||| || ||| Sbjct 18696 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCAATGTAAAGACGG 18637 Query 18789 TTGTTTGTACTCGTAACCCAGTCACATAAAC 18819 || | || || || | ||| | ||| |||| Sbjct 18636 TTTTCGGTGCTGGTTATCCAATTACAGAAAC 18606 >seq18603 Length=6435 Score = 118 bits (130), Expect = 3e-22 Identities = 165/227 (73%), Gaps = 11/227 (5%) Strand=Plus/Plus Query 18248 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTG 18307 |||||| || | ||||| | ||| || | | ||||||||||||| |||||||| || | Sbjct 3298 GAATACACCAGTTACACCTAACATGTGAACCAGATGCATAAGGATGTTGTGTTCTGCCAG 3357 Query 18308 GAATACGA-ACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAAC 18366 ||||| | ||||||| |||||| |||| || || | |||||||||||||| ||| | Sbjct 3358 AAATACAATACATGAAGTTGAAA-TACCAGATATTCCTAAAGGCATACCATCAGGGAAGC 3416 Query 18367 TCCCTTGTCCAAAAGGATA-AACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAA 18425 ||||| |||| |||||| | | ||||| | |||||||| || | || ||| Sbjct 3417 GTCCTTGACCAATAGGATAGATCAAGAAA-------ACAGCAGCTGCAAC-GAAGCTGAA 3468 Query 18426 TAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTC 18472 || |||||| |||||| | ||||||| || |||||||||| Sbjct 3469 TATGCAACAACAATCCAAAGATGCATACCCAGATAGGAACTAAGTTC 3515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151236200535030