Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq6402 452 1e-122 seq18603 82.4 2e-11 >seq6402 Length=20154 Score = 452 bits (500), Expect = 1e-122 Identities = 692/984 (70%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| || || ||||| ||||||||||| || ||||| ||||| | || |||||| Sbjct 19590 GCTAGGTCCAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 19531 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 || ||||| | | ||||||||| || || | || | | || ||||| || Sbjct 19530 GCACGGTTGATGATATCAGCCCAAGTGTTAATGACACGACCCTGACTGTCAACTACGGAT 19471 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| || || |||||||||||||| || ||||| |||| ||||| | || || | | Sbjct 19470 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAGTGAAC 19411 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || |||| || ||||||| ||| | |||||||| | |||||| || |||||| Sbjct 19410 CAGATACCAATTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAATTGTTAAAA 19351 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || ||||| || |||||||| ||| Sbjct 19350 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTC 19291 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| || || | || || || || | | || || ||||| Sbjct 19290 TCTTCCTCTTGACCGAATCTGTAACCTGCGTTAGCAGATTCGTTTTCAGTGGTTTCCCTG 19231 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | || || ||||| || ||||||||| ||| || | || ||||| || Sbjct 19230 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 19171 Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356 ||||| ||||| ||| || ||||| ||||| || || || ||||| || |||||||| Sbjct 19170 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCCTGGAATACA 19111 Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416 | ||||||||| ||||||||||| || || | |||||| |||||| ||||| ||||| Sbjct 19110 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGA 19051 Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476 || | ||| || | || || || || ||| || | | || |||| |||||||||| Sbjct 19050 CCAATAGGGTAGATCAAAAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 18991 Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCT 26536 ||||| || | ||| || || | | || |||||||||| | || || Sbjct 18990 GCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAA 18931 Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596 ||||| || | ||||||||| | | ||| || | ||| || || |||||||||| |||| Sbjct 18930 GCTACGCCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAC 18871 Query 26597 TCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAG 26656 || || | | | ||||||||||| ||||||||||||| || || || ||| | Sbjct 18870 TCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCAGAAGTA 18811 Query 26657 GGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCA 26716 || | | || || || || ||||| |||||||| | || || || ||||| || ||| Sbjct 18810 GGAATAATAGCACCAGAGATAATATTATTTCCGTAAAGTAGAGAACCAGAAACAGGTTCA 18751 Query 26717 CGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAGT 26775 || || ||||| |||||||| || || || || ||||| |||| ||||| ||| | ||| Sbjct 18750 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCAATAATAAATACA-GAAGT 18692 Query 26776 GGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCTC 26835 || | | |||| || ||||| | || |||||||| || | || |||||||| || Sbjct 18691 TGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCAATGTAAAGACGGTTTTC 18632 Query 26836 AGTACTTGTAACCCACTCACAAAA 26859 || || || | ||| | ||| || Sbjct 18631 GGTGCTGGTTATCCAATTACAGAA 18608 >seq18603 Length=6435 Score = 82.4 bits (90), Expect = 2e-11 Identities = 138/196 (70%), Gaps = 9/196 (5%) Strand=Plus/Plus Query 26290 GAAAACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTG 26349 ||| || |||| ||||| ||| || | | ||||| || || || |||||||| | Sbjct 3298 GAATACACCAGTTACACCTAACATGTGAACCAGATGCATAAGGATGTTGTGTTCTGCCAG 3357 Query 26350 GAATACGA-ACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAAC 26408 ||||| | |||| ||||| ||| ||||||| || || | |||||| |||||| || | Sbjct 3358 AAATACAATACATGAAGTTGAAA-TACCAGATATTCCTAAAGGCATACCATCAGGGAAGC 3416 Query 26409 TCCCTTGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTAT 26468 ||||| || | |||||| | ||||| || || |||||| | | |||| || Sbjct 3417 GTCCTTGACCAATAGGATAGATCAAGAAAACAGC---AGCTGC----AACGAAGCTGAAT 3469 Query 26469 ATGCAACAAATATCCA 26484 ||||||||| ||||| Sbjct 3470 ATGCAACAACAATCCA 3485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147631759610400