Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq6402 502 7e-138 seq18603 102 2e-17 >seq6402 Length=20154 Score = 502 bits (556), Expect = 7e-138 Identities = 712/993 (72%), Gaps = 10/993 (1%) Strand=Plus/Minus Query 40528 CAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTA 40587 ||| ||||| ||| ||||| ||||||||||| ||||| || ||||||||||||||||| | Sbjct 19595 CAGCAGCTAGGTCCAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAA 19536 Query 40588 GACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTA 40647 | | | ||| | | |||||||||||| |||||| ||| | | ||| |||| Sbjct 19535 GGTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATGACACGACCCTGACTGTCAACTA 19476 Query 40648 CTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGG 40707 | || ||||| || || |||||||| ||||| |||||||| || ||||| | | | Sbjct 19475 CGGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAG 19416 Query 40708 TAAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCTATTG 40766 | | ||| || ||||| || || ||||| ||||||| ||| |||| | ||| |||| Sbjct 19415 TGAACCAGATACCAATTACAGGCCAAGCAGCCAAGAA-GAAATGTAAAGAACGAGAATTG 19357 Query 40767 TTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTA 40826 || || ||||||||| || || | || ||||| ||||| || ||||||||||| ||| Sbjct 19356 TTAAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTA 19297 Query 40827 TAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTC 40886 |||||||| | || ||||| || | || || ||| ||||| |||| ||||| Sbjct 19296 TAAGTCTCTTCCTCTTGACCGAATCTGTAACCTGCGTTAGCAGATTCGTTTTCAGTGGTT 19237 Query 40887 TCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCA 40943 |||| || | | |||| || ||||| || ||||||||| || | | || Sbjct 19236 TCCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAGCCG 19180 Query 40944 CCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCT 41003 || || || || || || || | ||| || ||||| ||||| || ||||||||||| || Sbjct 19179 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCC 19120 Query 41004 TGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||| |||| ||| |||||||| || ||| ||||||||||||||||||||||||||| Sbjct 19119 TGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAA 19060 Query 41064 GAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTG 41123 || ||||| | || || | || || ||||| ||| |||| | ||||||| Sbjct 19059 CTTCCTTGACCAATAGGGTAGATCAAAAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 19000 Query 41124 TATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCA 41183 ||||| ||| ||||| || | |||||| || | | | ||||||||||| | ||| Sbjct 18999 TATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 18940 Query 41184 GCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTG 41243 ||| ||||| || | ||| ||||| | ||||| || | ||| || || || ||| Sbjct 18939 ATGTAACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTG 18880 Query 41244 TATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCG 41303 |||| |||||| || | | | ||||||||||||||||| ||||||| || || || Sbjct 18879 TATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCT 18820 Query 41304 TTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAA 41363 ||| | |||| | ||| ||||| |||||||| || ||||| | || || || ||| Sbjct 18819 GCAGAAGTAGGAATAATAGCACCAGAGATAATATTATTTCCGTAAAGTAGAGAACCAGAA 18760 Query 41364 ACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA- 41422 || || ||||| || ||||| |||||||| || || || || || || || || || || Sbjct 18759 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCAATAATAAAT 18700 Query 41423 ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAG 41482 ||| | || || || | ||| | || ||||| | ||||| ||||| || | ||| || Sbjct 18699 ACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCAATGTAAAG 18641 Query 41483 GCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||| |||||||| || | ||| ||||| || Sbjct 18640 ACGGTTTTCGGTGCTGGTTATCCAATTACAGAA 18608 >seq18603 Length=6435 Score = 102 bits (112), Expect = 2e-17 Identities = 122/162 (75%), Gaps = 9/162 (6%) Strand=Plus/Plus Query 40980 TGCATGAGAATGTTGTGTTCTGCTTGGAAGACAA-ACATGAAGTTGAATGTTCCACTGAT 41038 ||||| || |||||||||||||| | || |||| ||||||||||||| | ||| || Sbjct 3332 TGCATAAGGATGTTGTGTTCTGCCAGAAATACAATACATGAAGTTGAAA-TACCAGATAT 3390 Query 41039 TCCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGC 41098 |||||||||||||||||||| ||| || ||||| | ||||| | ||||| ||||| Sbjct 3391 TCCTAAAGGCATACCATCAGGGAAGCGTCCTTGACCAATAGGATAGATCAAGAAAACAGC 3450 Query 41099 TAGAGCTGCTGACAATGGAGCTGTGTATGCCACAAATATCCA 41140 ||||| ||| | ||||| ||||| |||| ||||| Sbjct 3451 ---AGCTG----CAACGAAGCTGAATATGCAACAACAATCCA 3485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143624337712830