Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq6402 612 2e-170 seq18603 129 7e-25 >seq6402 Length=20154 Score = 612 bits (678), Expect = 2e-170 Identities = 707/950 (74%), Gaps = 4/950 (0%) Strand=Plus/Minus Query 67357 CAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAA 67416 ||||||| ||||| ||||||||||||||||| ||||| || ||||| |||||||| |||| Sbjct 19595 CAGCAGCTAGGTCCAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATACCAA 19536 Query 67417 GTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGC--GTCAAC 67474 | || | ||| | ||| || |||||||| ||| || ||| ||| |||||| Sbjct 19535 GGTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATGACACGACC--CTGACTGTCAAC 19478 Query 67475 GACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGC 67534 |||||||||||||| |||||||| || |||||||| ||||| || | ||| | || Sbjct 19477 TACGGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGC 19418 Query 67535 AGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTT 67594 |||||||||||| | | ||||| | ||||| | |||||| || | | | || || Sbjct 19417 AGTGAACCAGATACCAATTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAATT 19358 Query 67595 GTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTT 67654 ||| ||| ||||| ||||||||||| || || || || ||||||||||| || || || Sbjct 19357 GTTAAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATT 19298 Query 67655 GTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGT 67714 ||||||||||| ||||| ||||| ||||||| ||| || || | ||||| || Sbjct 19297 ATAAGTCTCTTCCTCTTGACCGAATCTGTAACCTGCGTTAGCAGATTCGTTTTCAGTGGT 19238 Query 67715 TTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774 ||| ||||| | | ||| || || | ||||| ||||||||||| || || || || || Sbjct 19237 TTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCC 19178 Query 67775 GAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTG 67834 ||||||||| ||||| || | ||| || ||||| ||||||||||||||||| || || || Sbjct 19177 GAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGTTCCGCCTG 19118 Query 67835 GAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGA 67894 ||| || | ||| |||| ||||||||||| || || | |||||| | ||||||||| Sbjct 19117 GAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACT 19058 Query 67895 ACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTA 67954 |||||||| | ||| |||| ||| || ||||| || || | || ||||| || || Sbjct 19057 TCCTTGACCAATAGGGTAGATCAAAAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATA 18998 Query 67955 TGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACA 68014 ||| ||| ||||||||||||||||| |||||| || ||||||||||| |||||| Sbjct 18997 TGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 18938 Query 68015 GTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATA 68074 ||| | | || | | |||||| | || | || | |||| |||||||| || Sbjct 18937 GTAACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTA 18878 Query 68075 CAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTT 68134 ||||||||||| | || ||||||||||||||| || || || || | ||| || || Sbjct 18877 TAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGC 18818 Query 68135 TGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAAC 68194 ||| |||||| || ||||||||| || || || || ||||| | || ||||| | ||| Sbjct 18817 AGAAGTAGGAATAATAGCACCAGAGATAATATTATTTCCGTAAAGTAGAGAACCAGAAAC 18758 Query 68195 AGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCA 68254 |||||| | |||||||| ||||| |||||||| || |||||||| ||||| || || Sbjct 18757 AGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCAATAATAAATAC 18698 Query 68255 AGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAA 68304 || | ||| | | ||| ||| |||||||| ||||||||||| |||| Sbjct 18697 AGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCACCCAA 18648 >seq18603 Length=6435 Score = 129 bits (142), Expect = 7e-25 Identities = 175/239 (73%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 67775 GAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTG 67834 ||||||||| | ||| || | ||| || | | ||||||||||||||||| ||||| | Sbjct 3298 GAATACACCAGTTACACCTAACATGTGAACCAGATGCATAAGGATGTTGTGTTCTGCCAG 3357 Query 67835 GAACACGA-ACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAG 67893 || || | ||||| |||| ||| ||||||| || || | |||||| | |||| ||| Sbjct 3358 AAATACAATACATGAAGTTGAAA-TACCAGATATTCCTAAAGGCATACCATCAGGGAAGC 3416 Query 67894 AACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGT 67953 |||||||| | |||||||| |||||| ||||| |||||| || | ||| || | Sbjct 3417 GTCCTTGACCAATAGGATAGATCAAGAAAACAGC---AGCTGCA-AC---GAAGCTGAAT 3469 Query 67954 ATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCA 68012 |||| ||| |||||| || ||||||| ||| | || |||||| ||| | ||||| Sbjct 3470 ATGCAACAACAATCCAAAGATGCATACCCAGATAGGAACTAAGTTCATACTCATGACCA 3528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566623012504200