Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2268 127 3e-24 seq1774 122 1e-22 seq24876 87.8 2e-12 seq9829 87.8 2e-12 seq4041 87.8 2e-12 >seq2268 Length=36762 Score = 127 bits (140), Expect = 3e-24 Identities = 164/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | || | ||||| | ||| | || || ||||| |||| |||||| Sbjct 24542 TCCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATTGGAACAATACC 24601 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||||||| | |||||||| ||| |||||||| ||| |||| || || || || ||| Sbjct 24602 ATTAGATGTTCCATTTGTCCCACGGATATAACTGCCTGTTGCCCGGATGTTGTGAACAGA 24661 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| || || |||| |||||| || | || |||||||| Sbjct 24662 AACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTAAGCGTATCATATAT 24721 Query 69930 ACCCTCTATGCTATCATCTATCATG-TTAAGAAGAAAACAGCTA 69972 ||||| |||||||||||| ||||| || ||| ||||||||| Sbjct 24722 CCCCTCAATGCTATCATCTTTCATGCATATCAAG-AAACAGCTA 24764 Score = 89.7 bits (98), Expect = 7e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || |||||||| || || ||||| || |||||||||||| | ||| | ||||| | Sbjct 24871 GTGCCTGCATTAAACAAGGTGGGAGAAGCATGAGTGAACCATCGCTGAGACATCAGATGG 24930 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || ||| ||| | || | || || | ||| ||||| | || || | ||||| | Sbjct 24931 TAAGTTCTGATAACAGACTTGATGTCATCTTTATGGATTCCAACAGCTACTCTCATCAGC 24990 Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170 || || || || | || || || || || |||||| || ||||| | || ||| Sbjct 24991 ATGTGTTGTGGCCTCTCGACTACCTTGCCATATACTTTCAAGAGATATGACCTCTCAAGA 25050 Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 |||||||| ||||| |||| || ||| |||| || ||||| || Sbjct 25051 GTTTTAAATCCAAAGTAGTCATAGTCAAAATCTCGATCATAAATTAT 25097 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || |||||||| |||||| |||| | | ||| ||| |||||| || || | ||||||| Sbjct 23244 TCAAATTCATCACCCCAACAATCAGCAAGTCCTGGAGCTTCATTAGGGCAAAACAATGAC 23303 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || ||| | || ||||| || |||||| ||||| ||||||||||| || ||| Sbjct 23304 CATTGTCCATTACTCTGAACTCTTTCCATAAAGAGATCAGGAATCCAAAGGGCATAAAAC 23363 Query 69637 AGATCTCTGGTTCTATTTTCTTC 69659 || || || | ||||| ||||| Sbjct 23364 AGGTCCCTAGCTCTATGCTCTTC 23386 >seq1774 Length=40918 Score = 122 bits (134), Expect = 1e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | || | ||||| | ||| | || || ||||| |||| |||||| Sbjct 29356 TCCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATGGGAACAATACC 29415 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||| ||| | |||||||| ||| |||||||||||| |||| || || || || ||| Sbjct 29416 ATTGGATGTTCCATTTGTGCCACGGATATAACTTCCTGTTGCACGGATGTTGTGAACAGA 29475 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| || || |||| |||||| |||| || |||||||| Sbjct 29476 AACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTCAGAGTATCATATAT 29535 Query 69930 ACCCTCTATGCTATCATCTATCATG 69954 ||||| |||||||| ||| ||||| Sbjct 29536 TCCCTCAATGCTATCTTCTTTCATG 29560 >seq24876 Length=3860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/153 (75%), Gaps = 5/153 (3%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCT-ACTAATTAATTCGTTAGAAAATGTGA 39674 ||||||||||||||| || |||||||| || | | ||| |||| ||| || || |||| Sbjct 1257 GCAGGCGAAGTCACAGTGGAGGCCCTCGTCGCAGAAGAATGAATTTGTTGGAGAAGGTGA 1316 Query 39675 GTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG-ATCCAGAAAAG 39733 | || ||||| || ||||| || |||||||| || || || ||| ||| | | | ||| Sbjct 1317 GGCCGGGCATGAGGCCACGTTTCTTGAGCCAGAAGATAGC-GCAGAAGGAGTCGGTGAAG 1375 Query 39734 AAGATGCCTTCTACTGC-TGCAAATGCAACAAG 39765 |||||||| || ||| || || |||||||| Sbjct 1376 AAGATGCC-CCTGATGCAAGCGAAGGCAACAAG 1407 >seq9829 Length=14110 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| ||||| ||||| || || | || | ||||| || || ||||| Sbjct 4016 GCAGGCGAAGTCGCAATGAAGGCCTTCGTCACGGGAGATAAGCTCGTTGGAGAAGGTGAG 4075 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGA 39734 || ||||| || || ||||| ||||||||||| || || ||| || || ||||| |||| Sbjct 4076 CCCCGGCATAAGGCCGCGCTTCTTGAGCCAAAAGATAGC-GCAGAAGGAGCCAGAGAAGA 4134 Query 39735 AGATGCCTTC 39744 |||| || || Sbjct 4135 AGATTCCCTC 4144 >seq4041 Length=27173 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || || |||||||| || | || | ||||| || || ||||| Sbjct 732 GCAGGCGAAGTCGCAGTGGAGGCCCTCGTCACGGGAGATGAGCTCGTTTGAGAAGGTGAG 673 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGA 39734 || ||||| || || ||||| |||||||| || ||||| ||| || || || || |||| Sbjct 672 ACCCGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGC-GCAGAAGGAGCCGGAGAAGA 614 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTC 39771 |||| || || || || || ||||| || | ||| Sbjct 613 AGATTCCCTCGACGCAGGCGAAAGCAACGAGGCGCTC 577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686516016961800