Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq9829 102 6e-17 seq553 96.9 3e-15 >seq9829 Length=14110 Score = 102 bits (112), Expect = 6e-17 Identities = 254/381 (67%), Gaps = 6/381 (2%) Strand=Plus/Minus Query 43904 CGGTT--TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTG 43961 ||||| ||||| || ||||| | || || || || || || || || || || | Sbjct 4393 CGGTTCATGCGC--GACGTTCAGCTCCCCGAGGCTCGCGCCTTCTACGGCTTCCAGATCG 4336 Query 43962 CCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATG 44021 |||| || || ||||| ||||| |||||| || || | || || |||||||| || Sbjct 4335 CCATCGAGAACATTCACTCGGAGATGTACTCCCTCCTCCTCGACACCTACATCAAGGACC 4276 Query 44022 GGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAG 44081 |||||||| || | || |||| || || || || || | | | || | Sbjct 4275 CTGACGAGAAGACCCGTCTCTTCCATGCCATCGACACGGTCCCCTCCGTCTCCCGAAAGG 4216 Query 44082 CAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGT 44141 | ||||||||||| ||||| | ||| | || || | ||||| |||||||| | Sbjct 4215 CCGACTGGGCCCTGCGCTGGATTGAATCATCCGGCTCCTTCGCCGAACGGCTTGTCGCCT 4156 Query 44142 TTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT-TGCGGCCATATTTTGGTTAAAG 44200 | || | | || || || ||||| || || || || ||| || || |||||| | ||| Sbjct 4155 TCGCCTGTTTCGAGGGAATCTTCTTCTCTGGCTCCTTCTGC-GCTATCTTTTGGCTCAAG 4097 Query 44201 AAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGC 44260 || || || | ||||| ||| | || || || || ||| | || ||||| |||||| Sbjct 4096 AAGCGCGGCCTTATGCCGGGGCTCACCTTCTCCAACGAGCTTATCTCCCGTGACGAAGGC 4037 Query 44261 TTACATTGCGATTTTGCTTGC 44281 | |||||||| || || ||| Sbjct 4036 CTTCATTGCGACTTCGCCTGC 4016 >seq553 Length=61157 Score = 96.9 bits (106), Expect = 3e-15 Identities = 227/340 (67%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 43943 TTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATA 44002 || || || || || ||||| || || || || || || || |||||| ||||| | Sbjct 8333 TTCTACGGTTTCCAGATTGCAATCGAGAACATCCACTCCGAGATGTACTCCCTTCTACTC 8274 Query 44003 GATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTA 44062 ||||| |||||||| || | |||||| ||| | || | || || || || || Sbjct 8273 GATACCTACATCAAGGACCCCAATGAGAAGTCTCGCCTCTTCCACGCCATCGACACCGTC 8214 Query 44063 CCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTT 44122 |||||| | | || || ||||||||||| |||||| |||| | || || Sbjct 8213 CCTGCGGTCGCTCGGAAGGCCGACTGGGCCCTCCGATGGATTGATTCTTCCGGCTCATTC 8154 Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT-TGC 44181 | || ||||| ||||| || || | || ||||| || || || || || || ||| Sbjct 8153 GCCGAGCGACTCGTCGCCTTCGCCTGCTTCGAGGGCATATTTTTCTCCGGCTCCTTCTGC 8094 Query 44182 GGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTT 44241 ||||| || ||| | ||||| || || | ||||| || | || || || || ||| | Sbjct 8093 -GCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTCACCTTCTCCAACGAGCT 8035 Query 44242 AATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281 || ||||| || ||| | || ||||| ||||| ||| Sbjct 8034 CATCTCCCGTGACGAGGGCCTTCACTGCGACTTTGCCTGC 7995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397234411448725