Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2239 116 3e-21 seq10 98.7 8e-16 seq20732 95.1 1e-14 seq7691 82.4 6e-11 seq1389 82.4 6e-11 >seq2239 Length=36943 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||||||| || | |||| ||||||||||||| |||||| Sbjct 31445 GTGGACTCCTTCTGAATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTACCG 31504 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| ||||| || || || || | ||||| || || ||||||| || Sbjct 31505 GCGAAGATGAGCCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTG 31564 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || ||| || ||||| || || | ||||| || || ||| Sbjct 31565 ACATTGTCGATGGTGTCGGAGGATTCCACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTT 31624 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 31625 TTCACGAAGATCTGCAT 31641 >seq10 Length=144934 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||||| || | |||| | || ||||||||||| ||| Sbjct 69210 GTGGATTCCTTCTGAATGCTGTAGTCTGCCAGGGTGCGGCCATCCTCGAGCTGTTTCCCG 69269 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| | ||| |||||||| | | ||||| || ||| |||||| |||| Sbjct 69270 GCGAAGATGAGCCTCTGCTGATCCGGTGCGATCCCCTCCTTGTCGTGGATCTTTGCTTTC 69329 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 || | | | ||||||| | || || || || || || || || || || || ||| Sbjct 69330 AGATTGGCAATCGTGTCTGAGCTCTCCACCTCCAGGGTGATGGACTTTCCGGTGAGGGTT 69389 Query 27231 TTCACAAAGATTTGCAT 27247 || ||||| |||||||| Sbjct 69390 TTGACAAAAATTTGCAT 69406 >seq20732 Length=5382 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| || ||||||||| || | |||| | || || || || || || Sbjct 5008 GTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGTTGCTTGCCA 4949 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| | || |||||||| || | ||||| ||||| |||||| ||| Sbjct 4948 GCAAAGATGAGCCTTTGCTGATCCGGGGGTATTCCCTCCTTATCCTGAATCTTGGCTTTG 4889 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || |||||| || || || || | || || || |||||| Sbjct 4888 ACATTGTCAATTGTGTCAGAGGATTCAACCTCAAGGGTGATCGTCTTTCCAGTGAGAGTT 4829 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||||||||| Sbjct 4828 TTGACAAAGATTTGCAT 4812 >seq7691 Length=17496 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | || | |||| || | || || || || || || || ||||| Sbjct 16955 GCCACCGCGGAGACGAAGGACCAGGTGAAGAGTGGATTCCTTCTGGATGTTATAGTCTGC 17014 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || ||||| | || |||||||| || || || | || || | |||||| || || || Sbjct 17015 CAGTGTGCGCCCATCCTCGAGCTGCTTGCCTGCAAATATCAGCCTCTGTTGGTCTGGTGG 17074 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||| |||| | | |||| |||||| | | ||||| Sbjct 17075 GATTCCCTCCTTGTCCTGTATCTTTGCCTTCACGTTGTCTATAGTGTCCGAGCTCTCAAC 17134 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | || || || || ||||| |||||||||||||| Sbjct 17135 CTCCAGAGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATTTGCAT 17182 >seq1389 Length=44750 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| |||| ||| | ||| || || || || || ||||| ||| | |||| || Sbjct 22571 CGCAACACCAGATGGAGCGTGGACTCCTTCTGTATGTTGTAATCGGCAAGAGTGCGGCCG 22630 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 |||||||||||||| || || | ||||| | || || |||||||| | ||||| || Sbjct 22631 TCTTCGAGCTGTTTTCCTGCAAAGATGAGCCTTTGCTGGTCCGGCGGGATTCCCTCCTTG 22690 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | ||||| | | || || || | || || Sbjct 22691 TCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGCTCTCGACCTCCAAGGTAATG 22750 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || ||||| ||||| || |||||||| Sbjct 22751 GTCTTCCCAGTGAGAGTCTTCACGAATATTTGCAT 22785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424697491768440