Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4041 138 1e-27 seq9178 129 7e-25 seq9829 123 3e-23 seq7825 105 8e-18 seq24876 100 4e-16 seq13217 87.8 2e-12 seq1011 84.2 3e-11 >seq4041 Length=27173 Score = 138 bits (152), Expect = 1e-27 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||| ||||| || ||||| || || || ||||||||| ||||| |||||||| || Sbjct 717 GTGGAGGCCCTCGTCACGGGAGATGAGCTCGTTTGAGAAGGTGAGACCCGGCATGAGGCC 658 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || |||||||| || |||||||||||||| ||||| || || Sbjct 657 GCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATTCCCTCGACGCA 598 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGA 122825 || || |||| ||||| |||||||| |||| ||| Sbjct 597 GGCGAAAGCAACGAGGCGCTCGGCGAACGAGCCAGA 562 >seq9178 Length=15038 Score = 129 bits (142), Expect = 7e-25 Identities = 271/398 (68%), Gaps = 12/398 (3%) Strand=Plus/Plus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 ||||| || || || ||||| | || |||||| || || |||| || || || ||| Sbjct 7131 TCAAATCGCCCAGGCCGAAGCAAAGCAGAATCAAGAATGTCTGCGCGGTTGGTTGCTGCA 7190 Query 11513 ATAACCACAATGCCAGTCTCATTG---TCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569 || || | || || || |||| |||||||||||||||||||| | || |||||| Sbjct 7191 ATCACAATTATACCGGT---ATTGCCTTCAAAGCCATCCATCTCGGTCAATAGCTGATTA 7247 Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCA--CCAGCACTGCGTTGCTTGCCCA 11627 | || ||||| || ||||||||| || | | | | || | | | |||| | || | Sbjct 7248 AGAGTCTGTTCCCTTTCATCATTTCCT--CCTCCGATTCCTGTTCCTCTTTGCCTTCCAA 7305 Query 11628 CCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGA 11687 | |||||||||||||||| || ||||| || || ||| || ||| | | || | Sbjct 7306 CAGCATCAATCTCATCAACAAACACAATGCAAGGAGCATTCTCTTTGGCCTTCTTGAAAA 7365 Query 11688 GATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGC 11747 |||| ||||| | | ||||| |||||||||||||| || ||||| | | | || Sbjct 7366 GATCACGAACTCGTGAAGCACCAACACCAACAAACATTTCTACAAATTCAGATCCTGA-A 7424 Query 11748 ACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCC 11806 | || | ||||| ||| || ||||| || || || || || | |||||| || Sbjct 7425 ATTGAAAAAAATGGAACACCTGCCTCACCAGCAATTGCCTTAGCAAGCAAGGTCTTCCCA 7484 Query 11807 GTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGAT 11844 || ||||| ||| | |||||| | ||| ||||| Sbjct 7485 GTTCCTGGAGGACCAACAAGAAGGACACCTTTAGGGAT 7522 >seq9829 Length=14110 Score = 123 bits (136), Expect = 3e-23 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 122671 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCC 122730 || || || || || ||||| ||||| || || |||||| || || ||||| || || Sbjct 4032 TGAAGGCCTTCGTCACGGGAGATAAGCTCGTTGGAGAAGGTGAGCCCCGGCATAAGGCCG 4091 Query 122731 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 122790 |||||||| | |||| | ||||||||||| || || ||||||||||| ||||| | ||| Sbjct 4092 CGCTTCTTGAGCCAAAAGATAGCGCAGAAGGAGCCAGAGAAGAAGATTCCCTCGAAACAG 4151 Query 122791 GCAAACGCAAAAAGGCGTTCGGCGAAGGAGC 122821 || || || | ||| |||||||||||||||| Sbjct 4152 GCGAAGGCGACAAGCCGTTCGGCGAAGGAGC 4182 >seq7825 Length=17243 Score = 105 bits (116), Expect = 8e-18 Identities = 245/365 (67%), Gaps = 6/365 (2%) Strand=Plus/Minus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 ||||| ||||| || ||||| | || ||| || || || | || || || || ||| Sbjct 6627 TCAAATCGACCAGGCCGAAGTAAAGCAGAATCTAGAATGTCTGCACGGTTGGTCGCTGCA 6568 Query 11513 ATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATT 11572 || || | || ||||| | |||||||||||||| || || | | ||||| | Sbjct 6567 ATGACAATTATACCAGTATTTCCTTCAAAGCCATCCATTTCAGTCAAAAGCTGATTGAGA 6508 Query 11573 GTTTGTTCTCTCTCATCATTTGCTGGCATACCA--CCAGCACTGCGTTGCTTGCCCACCG 11630 || |||||||| ||||||||| || | | | | || | | | |||| | || || | Sbjct 6507 GTCTGTTCTCTTTCATCATTTCCT--CCTCCAATTCCTGTTCCTCTTTGCCTACCAACGG 6450 Query 11631 CATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGAT 11690 |||| |||||||||| || |||||||| || |||||| ||| | | || || | Sbjct 6449 CATCGATCTCATCAACAAACACAATACAAGGAGCATTTTCTTTGGCCTTCTTGAAAAGGT 6390 Query 11691 CGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACT 11750 | ||||| | ||||| ||||| |||||||| || ||||| | | | || | | Sbjct 6389 CACGAACTCGAGAAGCACCGACACCGACAAACATTTCTACAAATTCAGATCCTGA-AATT 6331 Query 11751 G-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTA 11809 | || || |||||| || ||||| || || || || || | |||||||| || Sbjct 6330 GAGAAAAACGGGACACCTGCCTCACCAGCAATTGCCTTAGCAAGCAAAGTCTTTCCAGTT 6271 Query 11810 CCTGG 11814 ||||| Sbjct 6270 CCTGG 6266 >seq24876 Length=3860 Score = 100 bits (110), Expect = 4e-16 Identities = 237/349 (68%), Gaps = 17/349 (5%) Strand=Plus/Plus Query 122480 TGAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGA 122539 |||| || || || | ||| |||| ||||||| | ||| | | |||||| ||| Sbjct 1094 TGAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCTCATGAGATGACCGTTCATCTCGA 1153 Query 122540 TGAG-GTTACATGGGAGTGCGTCCAAGATGAACC-CTTTCTCAATCTCAACCGCCTCTTT 122597 ||| || ||| ||||| ||||| ||| ||| | || ||||| ||||| || || Sbjct 1154 CGAGAGTGACA-GGGAGCGCGTCACAGAAGAAACTCTCGTTCAATGTCAACAGCGTCCGC 1212 Query 122598 CACGATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCAC 122657 ||||| || |||| || || || | || | | || | | || ||| || Sbjct 1213 AACGATTGCCTGGACAGCTT--GTTGCGG----AGGAGGC----TGTAGAGGAGG--CA- 1259 Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGA-AATAAGTTCATTTGAGAAGCATAGAC 122716 ||| || || |||||| ||||| || | | | ||| | || || |||||| || | Sbjct 1260 GGCGAAGTCACAGTGGAGGCCCTCGTCGCAGAAGAATGAATTTGTTGGAGAAGGTGAGGC 1319 Query 122717 CTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGA 122776 | |||||||| || || ||||| | ||| | ||||||||||| || ||| |||||||| Sbjct 1320 CGGGCATGAGGCCACGTTTCTTGAGCCAGAAGATAGCGCAGAAGGAGTCGGTGAAGAAGA 1379 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGA 122825 | ||| | || || || |||| |||| | ||||||||||||| ||| Sbjct 1380 TGCCCCTGATGCAAGCGAAGGCAACAAGGTGCTCGGCGAAGGAGCCAGA 1428 >seq13217 Length=10335 Score = 87.8 bits (96), Expect = 2e-12 Identities = 191/284 (67%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTT--GCTG 11597 || ||||||||||| || | | ||||| || || || || |||||||| || || | Sbjct 1101 AACCCATCCATCTCCGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCGTTGCCGCCG 1042 Query 11598 GCATACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATAC 11657 || || |||| | | ||| | |||||||||||||| ||||| ||||||||||| | Sbjct 1041 CCAAGCC--CAGCTCCTCTCTGCCTTCCCACCGCATCAATTTCATCGATGAAGACAATGC 984 Query 11658 ATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAA 11717 | ||| || | || | ||||| | ||| || ||||| || ||||| || | Sbjct 983 ACGGTGCCTTAGCCTTTGCCTTCTCAAACAAATCCCGGACCCTCGACGCTCCCACTCCCA 924 Query 11718 CAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCG 11777 |||| | |||||| || | | || | ||| || ||| ||||| | || || | Sbjct 923 CAAATAGCTCCACGAACTCGGACGCTGCACACGAGAAGAACGGGACTCCGGCCTCTCCTG 864 Query 11778 CGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCC 11821 | | || | || || || ||||| || ||||| ||| |||| Sbjct 863 CCACCGCCCTCGCCAGCAGCGTCTTGCCGGTACCCGGCGGACCC 820 >seq1011 Length=49915 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/233 (69%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 11501 TTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGT 11560 ||||| || ||||| || | || ||| | ||| ||| |||||||| || |||||| Sbjct 23685 TTAGTAGCAGCAATTACAATAACTCCACTATCACCACTAAAACCATCCATTTCAGTGAGT 23744 Query 11561 AATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCA--CCAGCACTGCGTT 11618 | ||||| | ||| |||||||| ||||||||| || | | | | || | | | | Sbjct 23745 AGCTGATTCAGTGTCTGTTCTCTTTCATCATTTCCT--CCTCCAATTCCTGTTCCCCTCT 23802 Query 11619 GCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATG----GTTGATTTTCGCGG 11674 || | || || ||||||||||||||||| || || | |||| ||| || || Sbjct 23803 GCCTTCCTACTGCATCAATCTCATCAATAAACACCAGGCATGGAGAGTTCATCTT----T 23858 Query 11675 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTC 11727 || | | ||| ||||| || || ||| || || || || ||||||||||| Sbjct 23859 GCCTTGTTAAACAGATCCCGCACTCTTGAAGCCCCGACTCCGACAAACATCTC 23911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627672883452000