Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4041 149 8e-31 seq553 132 6e-26 seq9829 120 4e-22 seq10792 87.8 2e-12 seq13217 82.4 9e-11 >seq4041 Length=27173 Score = 149 bits (164), Expect = 8e-31 Identities = 124/152 (82%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||| |||||||||||||||||||| || || |||||| ||||| |||||||| || Sbjct 717 GTGGAGGCCCTCGTCACGGGAGATGAGCTCGTTTGAGAAGGTGAGACCCGGCATGAGGCC 658 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || || || || ||||| ||||||||||| ||||| || || Sbjct 657 GCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATTCCCTCGACGCA 598 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGC 130178 ||||| |||| ||| ||||| || || |||| Sbjct 597 GGCGAAAGCAACGAGGCGCTCGGCGAACGAGC 566 >seq553 Length=61157 Score = 132 bits (146), Expect = 6e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| || |||||||||||||||||||| || || |||||| ||||| Sbjct 7998 GGCAAAGTCGCAGTGAAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 8057 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||||| || |||||||| | |||||| || || || || ||||| ||||| || || Sbjct 8058 GGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAAAATAT 8117 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGA 130182 ||||| | || ||||| || | ||| ||||| || || |||| ||| Sbjct 8118 GCCCTCGAAGCAGGCGAAGGCGACGAGTCGCTCGGCGAATGAGCCGGA 8165 >seq9829 Length=14110 Score = 120 bits (132), Expect = 4e-22 Identities = 142/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || || || |||||||||||||| || || || |||||| || || ||||| || || Sbjct 4032 TGAAGGCCTTCGTCACGGGAGATAAGCTCGTTGGAGAAGGTGAGCCCCGGCATAAGGCCG 4091 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 |||||||| | ||| || || || || || ||||||||||||||||| ||||| | ||| Sbjct 4092 CGCTTCTTGAGCCAAAAGATAGCGCAGAAGGAGCCAGAGAAGAAGATTCCCTCGAAACAG 4151 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 130207 ||||| || | || || || || ||||||| ||| || |||| ||| || ||| Sbjct 4152 GCGAAGGCGACAAGCCGTTCGGCGAAGGAGCCGGA---TGATTCAATCCAGCGCAGGGCC 4208 Query 130208 CACTGCGCCTTT 130219 || | |||||| Sbjct 4209 CAGTCGGCCTTT 4220 >seq10792 Length=12928 Score = 87.8 bits (96), Expect = 2e-12 Identities = 187/277 (68%), Gaps = 2/277 (1%) Strand=Plus/Plus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA-GG 14211 || ||||||||||| |||||||| ||||||||||| || || | ||||| || || | Sbjct 11975 AACCCATCCATCTCTGTCAAGAGCTGATTGATGGTCTGCTCCCTCTCATCGTTGCCACCG 12034 Query 14212 CATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 14271 | | | || || | | ||| | || || || ||||||||||| ||||| || || || Sbjct 12035 CCAAGC-CCGGCCCCTCTCTGCCTTCCCACCGCATCAATTTCATCTATGAACACAATGCA 12093 Query 14272 TGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCAC 14331 ||| || | || || || | ||| || || ||| || || || ||||| Sbjct 12094 CGGTGCCTTAGCCTTCGCCTTCTCGAACAAATCCCGGACCCTCGACGCCCCCACGCCCAC 12153 Query 14332 AAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGC 14391 |||| |||||| || | || || | || || |||||| ||| | || ||||| Sbjct 12154 GAACAGCTCCACGAACTCGGACGCCGCGCACGAGAAGAAGGGCACGCCGGCCTCTCCCGC 12213 Query 14392 GATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 14428 | |||||||| || || || || || || || ||| Sbjct 12214 CACCGCTCGGGCCAGCAGCGTTTTGCCGGTGCCGGGT 12250 >seq13217 Length=10335 Score = 82.4 bits (90), Expect = 9e-11 Identities = 155/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCAG 14210 || ||||||||||| |||||||| |||||||| || || || | ||||| || ||| | Sbjct 1101 AACCCATCCATCTCCGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCGTTGCCGCCG 1042 Query 14211 GCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATAC 14270 || | || || | | ||| | || || || ||||||||||||||||| || || | Sbjct 1041 CCAAGC--CCAGCTCCTCTCTGCCTTCCCACCGCATCAATTTCATCGATGAAGACAATGC 984 Query 14271 ATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCA 14330 | ||| || | || ||||| | ||| || || ||| || || || |||| Sbjct 983 ACGGTGCCTTAGCCTTTGCCTTCTCAAACAAATCCCGGACCCTCGACGCTCCCACTCCCA 924 Query 14331 CAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGAC 14376 |||| | |||||| || | || || | ||| || ||| ||||| Sbjct 923 CAAATAGCTCCACGAACTCGGACGCTGCACACGAGAAGAACGGGAC 878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618081571022200