Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4041 197 2e-45 seq9829 190 2e-43 seq553 176 5e-39 seq24876 132 5e-26 >seq4041 Length=27173 Score = 197 bits (218), Expect = 2e-45 Identities = 258/352 (73%), Gaps = 4/352 (1%) Strand=Plus/Plus Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTAT 59827 || |||||| || | |||||||| | ||||||| | ||| ||| || |||| || Sbjct 367 GACGTCCAGCTTCCTGAGGCCCGCGCCTTCTACGGCTTCCAGATCGC-CATCGAGAACAT 425 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 |||||| |||| ||| || ||| | |||| | | ||||||| || || |||||| | Sbjct 426 CCACTCTGAGATGTATTCTCTCCTCCTCGACACCTACATCAAGGACCCCGACGAGAAGTC 485 Query 59888 TGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCAT 59947 | || ||||||||||| || || ||| | || | || || || ||||| | Sbjct 486 CCGCCTCTTCCGTGCCATCGACACCATCCCTCCTGTCGCCCGCAAGGCCGAGTGGGCGCT 545 Query 59948 GCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGG 60006 | ||||| || |||| || || || || | || ||| | ||||| || ||||| | Sbjct 546 ACGCTGGATCGAATCCTCTGGC-TCGTTCGCCGAGCGCCTCGTTGCTTTCGCCTGCGTCG 604 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | |||||||||||||| ||||| ||||| || || ||||||||||| ||||| ||||||| Sbjct 605 AGGGAATCTTCTTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGCCTCA 664 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||| || | ||||| |||||||| || ||||| |||||||||||||| Sbjct 665 TGCCGGGTCTCACCTTCTCAAACGAGCTCATCTCCCGTGACGAGGGCCTCCA 716 >seq9829 Length=14110 Score = 190 bits (210), Expect = 2e-43 Identities = 257/353 (73%), Gaps = 4/353 (1%) Strand=Plus/Minus Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTAT 59827 || || ||| | ||||||| || | ||||||| | ||| ||| || |||| || Sbjct 4381 GACGTTCAGCTCCCCGAGGCTCGCGCCTTCTACGGCTTCCAGATCGC-CATCGAGAACAT 4323 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 ||||| |||| |||||| ||| | |||| | | ||||||| || || |||||| | Sbjct 4322 TCACTCGGAGATGTACTCCCTCCTCCTCGACACCTACATCAAGGACCCTGACGAGAAGAC 4263 Query 59888 TGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCAT 59947 |||| |||| |||||| || ||| |||| | || | ||| || || |||||| | Sbjct 4262 CCGTCTCTTCCATGCCATCGACACGGTCCCCTCCGTCTCCCGAAAGGCCGACTGGGCCCT 4203 Query 59948 GCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGG 60006 || ||||| || || | || || || || |||| || | || || || || | | Sbjct 4202 GCGCTGGATTGAATCATCCGGC-TCCTTCGCCGAACGGCTTGTCGCCTTCGCCTGTTTCG 4144 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | |||||||||||||||||||| ||||| ||||| || |||||||| ||||| ||||| | Sbjct 4143 AGGGAATCTTCTTCTCTGGCTCCTTCTGCGCTATCTTTTGGCTCAAGAAGCGCGGCCTTA 4084 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 ||||||| || | |||||||||||||| || ||||| ||||| ||||| ||| Sbjct 4083 TGCCGGGGCTCACCTTCTCCAACGAGCTTATCTCCCGTGACGAAGGCCTTCAT 4031 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 60270 ATGACGCAGTACATTCAGTTTGTCGCGGACCGCCT-CATGGCCCAGTTTGGAGAAGGACC 60328 |||| |||||||| ||||||| || |||||||| | || || | || | || Sbjct 3880 ATGAGCCAGTACATAGAGTTTGTGGCTGACCGCCTGCTTGTGTCACTG-GGTCACGGTAA 3822 Query 60329 AATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGAC 60388 || | || ||| ||||| ||||||||||||||| ||||||| || | |||||||| Sbjct 3821 GATGTTTGGGGTGGTGAACCCCTTCGACTGGATGGAGCTCATCTCGCTGCAGGGGAAGAC 3762 Query 60389 CAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||||||||| || ||| |||| || ||||| Sbjct 3761 CAACTTCTTCGAAAAGAGGGTTGGAGATTA 3732 >seq553 Length=61157 Score = 176 bits (194), Expect = 5e-39 Identities = 440/656 (67%), Gaps = 12/656 (2%) Strand=Plus/Minus Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAA-CGAGTCTAT 59827 || ||||| | |||||||||| | ||||||| | ||| | ||| |||| || Sbjct 8360 GACGTCCAACTCCCCGAGGCCCGCGCCTTCTACGGTTTCCAGAT-TGCAATCGAGAACAT 8302 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 ||||||||||| |||||| || | |||||| | ||||||| || | |||||| | Sbjct 8301 CCACTCCGAGATGTACTCCCTTCTACTCGATACCTACATCAAGGACCCCAATGAGAAGTC 8242 Query 59888 TGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCAT 59947 | | || |||| ||||| || || ||| || || | || || || |||||| | Sbjct 8241 TCGCCTCTTCCACGCCATCGACACCGTCCCTGCGGTCGCTCGGAAGGCCGACTGGGCCCT 8182 Query 59948 GCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGG 60006 | ||||| || || | || ||||| || | || ||| | || || || ||| | | Sbjct 8181 CCGATGGATTGATTCTTCCGGC-TCATTCGCCGAGCGACTCGTCGCCTTCGCCTGCTTCG 8123 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | || || || ||||| ||||| ||||| || || ||||||||||| ||||| ||||||| Sbjct 8122 AGGGCATATTTTTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGCCTCA 8063 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGT 60126 |||| || || | |||||||||||||| || ||||| ||||||||||| || || | Sbjct 8062 TGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCCTTCACTGCGACT 8003 Query 60127 TTGCAGTGACGCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATA---TTCACA 60183 |||| || | | || | | | | | || | || | || |||| | | | Sbjct 8002 TTGC-CTGCCTC-CTTTACGGCCTCCTCCGCAACAAGCTC-TCTGAGGACAAGGTCCGGG 7946 Query 60184 AGATTGTT-CAGTGGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGC 60242 || ||| | | | | | ||| | ||| | |||||| || || || || || | Sbjct 7945 CTATCGTTGCCGACGCCGT-TGATATCGAGCGGGAGTTCGTCTGCGACGCCCTGCCCGTC 7887 Query 60243 AAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGC 60302 ||| | || ||| | | || |||| |||||||| ||||||| || |||||| Sbjct 7886 GCGCTCGTCGGGATGAATGGTGCCCTGATGAGCCAGTACATCGAGTTTGTGGCCGACCGC 7827 Query 60303 CTCATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATG 60362 || | | | | || | | || ||||| || ||||| |||||||||||| Sbjct 7826 CTGCTCGGGGCGCTGGGCTACCGCAAGATGTACGGGGTCTCCAACCCATTCGACTGGATG 7767 Query 60363 GAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 || |||||| || | ||||||||||||||||| ||||| ||||||| || || Sbjct 7766 GAACTCATCTCTCTGCAGGGGAAGACCAACTTCTTCGAGAAAAGGGTCGGTGAGTA 7711 >seq24876 Length=3860 Score = 132 bits (146), Expect = 5e-26 Identities = 245/353 (69%), Gaps = 5/353 (1%) Strand=Plus/Minus Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTAT 59827 || ||| || | || ||||||| | ||||||| | ||| ||| || |||| || Sbjct 1623 GACGTCTAGCTCCCCAAGGCCCGCGCCTTCTACGGCTTCCAGATCGC-CATCGAGAACAT 1565 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 ||| || |||| |||||| ||| | |||| | | |||||| | || || |||||| Sbjct 1564 CCATTCTGAGATGTACTCCCTCCTCCTCGACACCTACGTCAAGTACCCCGACGAGAAGTT 1505 Query 59888 TGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCAT 59947 | | || |||| |||| || || |||||| || | ||| || || ||| || | Sbjct 1504 TCGCCTCTTCCACACCATCGATACCATCCCCGCCGTCGTTCGAAAGGCCGACTGGCCCCT 1445 Query 59948 GCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGG 60006 | ||||| || |||| || || || || | | || | || || || ||| | Sbjct 1444 TCGCTGGATCGATTCCTCTGGC-TCCTTCGCCGAGCACCTTGTTGCCTTCGCTTGCATCA 1386 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 || ||||||||| | | ||| ||||| ||||| ||||||||||| || |||||||||| Sbjct 1385 GGGGCATCTTCTTCACCGACTCCTTCTGCGCTATCTTCTGGCTCAAGAAACGTGGCCTCA 1326 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATT-TCCCGGGACGAGGGCCTCCA 60118 |||| ||||| | ||||||||| | | ||| | | | |||||||||||||| Sbjct 1325 TGCCCGGCCTCACCTTCTCCAACAAATTCATTCTTCTGCGACGAGGGCCTCCA 1273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548211146662800