Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq6402 538 4e-148 seq2385 176 5e-39 seq502 170 2e-37 seq18603 116 4e-21 >seq6402 Length=20154 Score = 538 bits (596), Expect = 4e-148 Identities = 694/955 (73%), Gaps = 2/955 (0%) Strand=Plus/Plus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||| ||||| | ||||| || | | || || | | ||| Sbjct 18642 TTTACATTGGGTGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTA 18700 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| |||| || ||||| || || || || ||||| || |||||||| ||||| || Sbjct 18701 TTTATTATTGCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTT 18760 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 | || |||||||| || ||||| || || ||||| || || | | || | || Sbjct 18761 TCTGGTTCTCTACTTTACGGAAATAATATTATCTCTGGTGCTATTATTCCTACTTCTGCA 18820 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || || || |||| || ||||||||||||||||||||| | ||||| || ||| | ||| Sbjct 18821 GCTATAGGTTTACATTTTTACCCAATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATAC 18880 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 ||||| || || || | || |||| | |||||| | | || | | ||||||| Sbjct 18881 AATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATG 18940 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || || | ||||||||||||| | | || || |||||||||||||| ||||||||| Sbjct 18941 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 19000 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565 || || || || | || || | || ||||| | |||| || | ||||||||| | Sbjct 19001 TCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTTTTGATCTACCCTATTGGTCAAGGAAGT 19060 Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625 |||||||||||||||||| | || || || ||||| |||||||||||| |||||||||| Sbjct 19061 TTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAG 19120 Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685 || || |||||||| || ||||| ||||| || ||| | || ||||| ||||| || || Sbjct 19121 GCGGAACACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 19180 Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745 || || || ||| || ||||| || | || || ||| | | || || || Sbjct 19181 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACC 19240 Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805 || ||||||||||| ||| ||||||| |||||| ||||| |||||||| || || Sbjct 19241 ACTGAAAACGAATCTGCTAACGCAGGTTACAGATTCGGTCAAGAGGAAGAGACTTATAAT 19300 Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865 || |||||||| || ||||| ||||| || | |||||||| |||||| ||| || || Sbjct 19301 ATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTTAACAAT 19360 Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925 || | | | || |||||| | || || | || || || | |||||||| ||||| Sbjct 19361 TCTCGTTCTTTACATTTCTTCTTGGCTGCTTGGCCTGTAATTGGTATCTGGTTCACTGCT 19420 Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985 | ||| || |||| ||||| |||||||| || |||||||| |||||||| || || | Sbjct 19421 TTAGGTATTAGCACCATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTT 19480 Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045 |||| ||| || ||| || |||| |||||| | |||||||| ||||||||| Sbjct 19481 GACAGTCAGGGTCGTGTCATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGT 19540 Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 |||||||| ||||| || |||||||||||||||||||| || ||||| ||||||| Sbjct 19541 ATGGAAGTAATGCATGAACGTAATGCTCACAACTTCCCTCTGGACCTAGCTGCTG 19595 >seq2385 Length=35819 Score = 176 bits (194), Expect = 5e-39 Identities = 239/331 (72%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||||| ||| | || |||||||| |||||| || ||||||| | | |||||||| Sbjct 13834 ACCTGCAACTATTCAATATCCTTATGAGAAATCAATTATGTCAGAGCGTTTTCGTGGTCG 13893 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 || |||| ||| ||||| || ||||| || || || || ||||| | |||||||| || Sbjct 13894 AATTCACTTTGAATTTGATAAATGTATTGCTTGCGAAGTATGTGTTCGTGTATGCCCAAT 13953 Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAGAAGAAAGAACTTAGAAA 19474 ||||||| || || |||||| || | | | | | || |||||| || | || Sbjct 13954 AGATCTACCTGTTGTTGATTGGAGATTGGAAAGAGATATGAAAAAGAAACAATTGCTTAA 14013 Query 19475 TTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCAAC 19534 |||| || || || || | ||||| || || |||||||| || |||||||||||||| Sbjct 14014 TTATAGTATTGATTTCGGGGTCTGTATATTTTGTGGTAACTGTGTCGAGTATTGCCCAAC 14073 Query 19535 AAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGACAGACATCAACTTAA 19594 ||||||| |||| ||||| |||||||||||| | |||| | ||| | || ||| |||| Sbjct 14074 AAACTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCA-CAAATTAA 14132 Query 19595 CTT-TGATAACGTCGCTCTTGGACGATTGCC 19624 || | || | || ||| | || || || || Sbjct 14133 ATTATAATCAAGTTGCTTTGGGTCGGTTACC 14163 >seq502 Length=63175 Score = 170 bits (188), Expect = 2e-37 Identities = 230/318 (72%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 19308 CAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCGTATACACTATGAG 19367 || |||||||| |||||| || ||||||| | | |||||||| || |||| ||| Sbjct 58597 CAATATCCTTATGAGAAATCAATTATGTCAGAGCGTTTTCGTGGTCGAATTCACTTTGAA 58656 Query 19368 TTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTATCAATCTACCAGTG 19427 ||||| || ||||| || || || || ||||| | |||||||| || ||||||| || Sbjct 58657 TTTGATAAATGTATTGCTTGCGAAGTATGTGTTCGTGTATGCCCAATAGATCTACCTGTT 58716 Query 19428 GTGGATTGGGTGATGAACAAACAGACAAAGAAGAAAGAACTTAGAAATTATTCGATAGAC 19487 || |||||| || | | | | | || |||||| || | |||||| || || Sbjct 58717 GTTGATTGGAGATTGGAAAGAGATATGAAAAAGAAACAATTGCTTAATTATAGTATTGAT 58776 Query 19488 TTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCAACAAACTGTCTATCC 19547 || || | ||||| || || |||||||| || ||||||||||||||||||||| |||| Sbjct 58777 TTCGGGGTCTGTATATTTTGTGGTAACTGTGTCGAGTATTGCCCAACAAACTGTTTATCA 58836 Query 19548 ATGACAGAAGAATATGAATTGGCTACATTTGACAGACATCAACTTAACTT-TGATAACGT 19606 ||||| |||||||||||| | |||| | ||| | || ||| |||| || | || | || Sbjct 58837 ATGACTGAAGAATATGAACTTTCTACTTATGATCGTCA-CAAATTAAATTATAATCAAGT 58895 Query 19607 CGCTCTTGGACGATTGCC 19624 ||| | || || || || Sbjct 58896 TGCTTTGGGTCGGTTACC 58913 >seq18603 Length=6435 Score = 116 bits (128), Expect = 4e-21 Identities = 164/225 (73%), Gaps = 9/225 (4%) Strand=Plus/Minus Query 176458 GAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTA 176517 |||||||||| | || || |||| || |||||| ||||||||| || || | || Sbjct 3515 GAACTTAGTTCCTATCTGGGTATGCATCTTTGGATTGTTGTTGCATATTCAGCTTC-GT- 3458 Query 176518 TCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGT 176577 |||||| || |||||| | ||||||| | ||||||||| ||| |||||||| Sbjct 3457 --TGCAGCT---GCTGTTTTCTTGATCTATCCTATTGGTCAAGGACGCTTCCCTGATGGT 3403 Query 176578 ATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGT-TTGTATTCCAAGCAGAGCACAA 176636 |||||| | || || || |||| |||||||| |||| ||||||| | ||||| ||||| Sbjct 3402 ATGCCTTTAGGAATATCTGGTA-TTTCAACTTCATGTATTGTATTTCTGGCAGAACACAA 3344 Query 176637 CATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTT 176681 ||| || ||||| | | || ||| | || ||| | ||||| || Sbjct 3343 CATCCTTATGCATCTGGTTCACATGTTAGGTGTAACTGGTGTATT 3299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603149314358400