Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq28260 187 8e-43 >seq28260 Length=3008 Score = 187 bits (206), Expect = 8e-43 Identities = 248/340 (73%), Gaps = 6/340 (2%) Strand=Plus/Minus Query 40075 GCGCGCCTTGATCCGGCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTC 40134 ||||||| || | ||||||||| |||||| |||||||||||||| ||||| | | Sbjct 346 GCGCGCCAGGAACGAGCCGAAGGTAATGATCTGCGCGACCTTGTCGGCGCCGTAACGCGC 287 Query 40135 GGTGACGTACCGGATGACCTCGCCGCGACG--CCGGTCATCGAAGTCGATGTCAACGTCG 40192 || || |||||||| ||| |||| || || | || ||| ||||| || | || Sbjct 286 CCGCACATAGCGGATGACTTCGTCGCGCCGGTCCTGGCA--GAAATCGATATCGAAATCC 229 Query 40193 GGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGA 40252 ||||| ||||||||||| || || || || |||||||| | || ||| || ||| Sbjct 228 GGCATCGACACGCGCTCAGGATTGAGAAAGCGCTCGAACAGAAGACCGAAGCGGAGCGGA 169 Query 40253 TCGAGGTCGGTGATC-CCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCC 40311 ||||| ||||||||| | | ||| |||||||| ||||| ||||| | ||||| || || Sbjct 168 TCGAGATCGGTGATCGTCAAAGCA-TAGGCGACGAGCGAGCCGGCACCGGAGCCGCGTCC 110 Query 40312 AGGACCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAA 40371 || |||||| | |||||||| |||||| | |||||| || | ||||| |||||| Sbjct 109 CGGCCCGACCGGTATGCCGTTCTTCTTGGCGAATTTGATGAAATCCGAGACGATCAGGAA 50 Query 40372 GTAGGACGGGAAGCCCATCTGGATGATCATGTCGATCTCG 40411 ||| ||| || ||||| |||||| | ||||| |||| Sbjct 49 ATAGCCCGGAAACTGCATCTTGATGATGACGTCGAGCTCG 10 Score = 84.2 bits (92), Expect = 7e-12 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 39231 TCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGA 39290 |||| |||||||| ||||| |||| | ||||||||||| ||||| ||||| |||| || Sbjct 1145 TCTTTTTGCCCATCGCCCGGCGCAAGATATCGGCCTGGCCGAGGCTATAGCCGGCGA-GA 1087 Query 39291 TC-TGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGTACGTCGGGTCCAGG 39349 || | || || ||||||||| ||||| ||| |||||| ||| | ||| | |||| Sbjct 1086 TCGCGGGCGATCTGCTGCACCTGTTCCTGATAGGTGATGACGCCGAATGTCTCCTTCAGG 1027 Query 39350 ATC 39352 ||| Sbjct 1026 ATC 1024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160319263734630