Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq948 113 3e-20 seq2079 109 4e-19 seq2239 102 6e-17 seq12074 89.7 3e-13 seq7691 89.7 3e-13 seq3282 84.2 1e-11 seq1389 84.2 1e-11 >seq948 Length=51001 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| || |||||||| || || || ||||| ||||| || || || Sbjct 18718 AAGATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACTATCACCCTCGAGGTGGAGTCT 18777 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 ||||||| | || | | || || || ||||| ||||| | ||||| || Sbjct 18778 TCGGACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAAGGGATCCCGCCGGAC 18837 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| | ||||||||||| || || || || |||| ||||| | | ||| ||| Sbjct 18838 CAGCAGCGCCTCATATTTGCCGGGAAGCAGCTTGAGGACGGCCGCACCCTCGCCGACTAC 18897 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || ||||||||||| Sbjct 18898 AACATCCAGAAAGAGTCCAC 18917 >seq2079 Length=38309 Score = 109 bits (120), Expect = 4e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| ||||| |||||||| || || || ||||| || || || || || | Sbjct 8429 AATGCAAATTTTTGTTAAGACCCTCACCGGTAAGACCATCACCCTTGAGGTAGAATCTTC 8488 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || | |||| || ||| |||||||||||| | | || ||||| Sbjct 8489 TGACACTATCGATAATGTAAAGGCTAAGATTCAAGACAAAGAAGGTATTACCCCTGATCA 8548 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | |||||||| || |||||| | || |||| ||||| |||| || ||||| Sbjct 8549 GCAAAGGCTGATATTTGCTGGGAAACAATTAGAGGACGGTCGCACCTTAGCGGACTACAA 8608 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 8609 CATCCAGAAGGAGTCTAC 8626 >seq2239 Length=36943 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| || || || ||||| || || || || ||| | Sbjct 31641 ATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTAGAGGTGGAATCCTCC 31582 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || || | || || || || Sbjct 31581 GACACCATCGACAATGTCAAGGC-CAAGATCCAAGACAAGGAGGGGATCCCCCCCGACCA 31523 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || ||||| || || || ||||||| ||||| || | ||| ||||| Sbjct 31522 GCAGCGGCTCATCTTCGCCGGTAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTACAA 31463 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 31462 CATTCAGAAGGAGTCCAC 31445 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || || || ||||| || || ||||| | | Sbjct 31413 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACCCTGGAGGTTGAGAGCTCT 31354 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || |||| |||| | | ||||| || ||| | || || || || Sbjct 31353 GACACGATCGACAACGTTAAGGCAAAGA-TCCAGGACAAGGAGGGTATTCCACCGGACCA 31295 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| ||||| || || || |||| ||||| ||| ||||||||| Sbjct 31294 GCAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGCACCCTAGCCGATTACAA 31235 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 31234 CATCCAGAAGGAGTCCAC 31217 >seq12074 Length=11460 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || |||||||| ||||| || || || ||||| || || ||||| ||| | Sbjct 2774 ATGCAGATCTTTGTTAAAACTCTCACCGGCAAGACCATCACCCTTGAGGTTGAATCCTCT 2833 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | |||| || || |||||||| || | || ||||| || Sbjct 2834 GATACCATCGATAATGTAAAGGCTAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 2893 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || |||||||| || ||||| || || | || || | | ||||||||| Sbjct 2894 CAAAGGCTGATCTTTGCCGGTAAGCAACTTGAGGATGGCCGGACCCTTGCAGATTACAAC 2953 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 2954 ATCCAGAAGGAGTCCAC 2970 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| ||||||||||| || || || || | || || || | || Sbjct 3458 ATGCAGATCTTTGTTAAGACCCTCACGGGGAAGACCATTACGTTGGAGGTGGAGAGCTCG 3517 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || |||| | | ||||| || || | || || ||||| Sbjct 3518 GACACGATCGATAATGTCAAGGCAAAGA-TCCAGGACAAGGAGGGGATTCCACCGGATCA 3576 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || ||||| |||| ||||| | | |||||||| Sbjct 3577 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAGGACGGCCGCACCCTGGCAGATTACAA 3636 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || ||||| Sbjct 3637 CATTCAGAAGGAATCCAC 3654 >seq7691 Length=17496 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||||||||| || || || |||||||| || ||||| | || Sbjct 17182 ATGCAAATCTTTGTCAAAACCCTCACCGGGAAGACCATCACTCTGGAGGTTGAGAGCTCG 17123 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || ||| || ||||| || || | || ||||| ||| Sbjct 17122 GACACTATAGACAACGTGAAGGCAAAGATACAGGACAAGGAGGGAATCCCACCAGACCAA 17063 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | |||||||| ||||| || || || || | ||||| | | || || ||| Sbjct 17062 CAGAGGCTGATATTTGCAGGCAAGCAGCTCGAGGATGGGCGCACACTGGCAGACTATAAC 17003 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || ||||| Sbjct 17002 ATCCAGAAGGAATCCAC 16986 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||||||||| || || || ||||| ||||| ||||| | || Sbjct 17410 ATGCAAATCTTTGTCAAAACCCTCACCGGGAAGACCATCACCCTCGAGGTTGAGAGCTCG 17351 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||| || ||||| || || | || ||||| ||| Sbjct 17350 GACACCATAGACAACGTGAAGGCAAAGATACAGGACAAGGAGGGCATCCCTCCAGACCAA 17291 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| ||||| || |||| || | ||||| || | ||| || ||| Sbjct 17290 CAGAGGCTCATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGGCCGACTATAAC 17231 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 17230 ATCCAGAAGGAATCTAC 17214 >seq3282 Length=30487 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| || || || |||||||| || || || | || Sbjct 24766 ATGCAGATCTTCGTGAAGACGCTCACCGGGAAGACCATCACTCTGGAGGTGGAGAGCTCG 24707 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | || ||| | || | || | | ||||| ||||| | || || || || Sbjct 24706 GATACTATCGACAATGTGAAGGCCAAGA-TACAGGACAAGGAAGGCATCCCTCCGGACCA 24648 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || ||||||||||| || || || |||| ||||| | | || ||||| Sbjct 24647 GCAAAGACTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGACTACAA 24588 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 24587 CATCCAGAAGGAGTCCAC 24570 >seq1389 Length=44750 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || ||||| || || || || || | || || || | || Sbjct 22785 ATGCAAATATTCGTGAAGACTCTCACTGGGAAGACCATTACCTTGGAGGTCGAGAGCTCG 22726 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | ||||| || || | ||||| || || Sbjct 22725 GACACCATCGACAATGTCAAGGCCAAGA-TCCAGGACAAGGAGGGAATCCCGCCGGACCA 22667 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || ||||| || ||||| || ||||||| |||||| | | ||||||||| Sbjct 22666 GCAAAGGCTCATCTTTGCAGGAAAACAGCTCGAAGACGGCCGCACTCTTGCCGATTACAA 22607 Query 23790 CATACAAAAAGAGTCCAC 23807 |||||| || |||||||| Sbjct 22606 CATACAGAAGGAGTCCAC 22589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337821153838460