Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2268 104 3e-17 seq1774 93.3 6e-14 >seq2268 Length=36762 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || ||||||||||| || || ||||| ||||| || |||||| | ||| | |||| | Sbjct 24871 GTGCCTGCATTAAACAAGGTGGGAGAAGCATGAGTGAACCATCGCTGAGACATCAGATGG 24930 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 || ||| ||| | || | ||||| || ||| ||||| || ||||| | ||||| | Sbjct 24931 TAAGTTCTGATAACAGACTTGATGTCATCTTTATGGATTCCAACAGCTACTCTCATCAGC 24990 Query 78519 ATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 78578 || || || || || || || ||| || || |||||| | ||||| | || | | Sbjct 24991 ATGTGTTGTGGCCTCTCGACTACCTTGCCATATACTTTCAAGAGATATGACCTCTCAAGA 25050 Query 78579 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 |||||||| ||||| |||| || ||| |||| || ||||| || Sbjct 25051 GTTTTAAATCCAAAGTAGTCATAGTCAAAATCTCGATCATAAATTAT 25097 Score = 102 bits (112), Expect = 1e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 ||||| ||||| | ||| | || || | ||| | || || | |||||||| |||||| Sbjct 24543 CCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATTGGAACAATACCA 24602 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 ||||||||||||||||| ||| |||||||| || |||| || || || || || Sbjct 24603 TTAGATGTTCCATTTGTCCCACGGATATAACTGCCTGTTGCCCGGATGTTGTGAACAGAA 24662 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| || ||| ||||| ||| || || | ||||| || || Sbjct 24663 ACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTAAGCGTATCATATATC 24722 Query 78339 CCCTCTATACTGTCATCCATCATG-TTAAGAAGAAAACAGCTA 78380 ||||| || || ||||| ||||| || ||| ||||||||| Sbjct 24723 CCCTCAATGCTATCATCTTTCATGCATATCAAG-AAACAGCTA 24764 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 ||||||||||| |||||| |||| | | ||| || |||||| ||||| | ||||||| Sbjct 23244 TCAAATTCATCACCCCAACAATCAGCAAGTCCTGGAGCTTCATTAGGGCAAAACAATGAC 23303 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || | |||| || ||||| || ||||||||||||||| ||||| || ||| ||| Sbjct 23304 CATTGTCCATTACTCTGAACTCTTTCCATAAAGAGATCAGGAATCCAAAGGGCATAAAAC 23363 Query 78045 AGATCTCGGGTTCTATGTTCTTC 78067 || || | | |||||| ||||| Sbjct 23364 AGGTCCCTAGCTCTATGCTCTTC 23386 >seq1774 Length=40918 Score = 93.3 bits (102), Expect = 6e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 ||||| ||||| | ||| | || || | ||| | || || | ||| |||| |||||| Sbjct 29357 CCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATGGGAACAATACCA 29416 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 || |||||||||||||| ||| ||||||||||| |||| || || || || || Sbjct 29417 TTGGATGTTCCATTTGTGCCACGGATATAACTTCCTGTTGCACGGATGTTGTGAACAGAA 29476 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| || ||| ||||| ||| || |||| ||||| || || Sbjct 29477 ACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTCAGAGTATCATATATT 29536 Query 78339 CCCTCTATACTGTCATCCATCATG 78362 ||||| || || || || ||||| Sbjct 29537 CCCTCAATGCTATCTTCTTTCATG 29560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694271579696800