Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2268 107 3e-18 seq9829 104 3e-17 seq1774 93.3 6e-14 >seq2268 Length=36762 Score = 107 bits (118), Expect = 3e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || |||||||||||||| || ||||| ||||||||||||||| | ||| | |||| | Sbjct 24871 GTGCCTGCATTAAACAAGGTGGGAGAAGCATGAGTGAACCATCGCTGAGACATCAGATGG 24930 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || ||| ||||| | | || || || ||| ||||| ||||| || | ||||| | Sbjct 24931 TAAGTTCTGATAACAGACTTGATGTCATCTTTATGGATTCCAACAGCTACTCTCATCAGC 24990 Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 77173 || || || || | || || ||| || || |||||| | ||||| | || | | Sbjct 24991 ATGTGTTGTGGCCTCTCGACTACCTTGCCATATACTTTCAAGAGATATGACCTCTCAAGA 25050 Query 77174 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 |||||||| ||||| |||| || ||| |||| || ||||| || Sbjct 25051 GTTTTAAATCCAAAGTAGTCATAGTCAAAATCTCGATCATAAATTAT 25097 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||||||||| |||||| |||| | | || ||| |||||| || || | ||||||| Sbjct 23244 TCAAATTCATCACCCCAACAATCAGCAAGTCCTGGAGCTTCATTAGGGCAAAACAATGAC 23303 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || | |||| || ||| | || ||||||||||||||| ||||| || ||| ||| Sbjct 23304 CATTGTCCATTACTCTGAACTCTTTCCATAAAGAGATCAGGAATCCAAAGGGCATAAAAC 23363 Query 76640 AGATCTCGGGTTCTACGTTCTTC 76662 || || | | |||| | ||||| Sbjct 23364 AGGTCCCTAGCTCTATGCTCTTC 23386 >seq9829 Length=14110 Score = 104 bits (114), Expect = 3e-17 Identities = 228/339 (67%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || || || || |||||||||||||| || | || | ||||| || || |||||| Sbjct 4017 CAGGCGAAGTCGCAATGAAGGCCTTCGTCACGGGAGATAAGCTCGTTGGAGAAGGTGAGC 4076 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 || ||||| || || ||||| ||||||||||| ||||| ||| || ||||| ||||| Sbjct 4077 CCCGGCATAAGGCCGCGCTTCTTGAGCCAAAAGATAGCGCAGAAGGAGCCAGAGAAGAAG 4136 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA-TGAAT 46808 || || || | | ||||| |||||||| | || || || || || | | ||| Sbjct 4137 ATTCCCTCGAAACAGGCGAAGGCGACAAGCCGTTCGGCG-AAGGAGCCGGATGATTCAAT 4195 Query 46809 CCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 46868 ||| | | ||||| || |||||| || | || | || || || |||| || Sbjct 4196 CCAGCGCAGGGCCCAGTCGGCCTTTCGGGAGACGGAGGGGACCGTGTCGATGGCATGGAA 4255 Query 46869 GAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTC 46928 |||| | | || || ||| || || | || || || | | || ||||| || Sbjct 4256 GAGACGGGTCTTCTCGTCAGGGTCCTTGATGTAGGTGTCGAGGAGGAGGGAGTACATCTC 4315 Query 46929 TGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAA 46967 || |||||||| || || || ||||| || ||||| || Sbjct 4316 CGAGTGAATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 4354 >seq1774 Length=40918 Score = 93.3 bits (102), Expect = 6e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 ||||| ||||| | ||| | ||||| | ||| | || || | ||| |||| ||| || Sbjct 29357 CCTCCTTGATCAACATAACGAGCAGTATCATTGAACACCCTTAGCATGGGAACAATACCA 29416 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| |||||||| ||| ||||||||||| |||||| || || || ||| Sbjct 29417 TTGGATGTTCCATTTGTGCCACGGATATAACTTCCTGTTGCACGGATGTTGTGAACAGAA 29476 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || || |||| |||||| |||| || ||||| || Sbjct 29477 ACACCAATTCCTCCAGCTGACTTGCTTATTATAGCACACTCCTTCAGAGTATCATATATT 29536 Query 76934 CCCTCTATACTATCATCCATCATG 76957 ||||| || ||||| || ||||| Sbjct 29537 CCCTCAATGCTATCTTCTTTCATG 29560 Score = 86.0 bits (94), Expect = 9e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || |||||||| ||||| || || || |||||||||||||| | ||| | |||| | Sbjct 29683 GTGCCTGCATTGAACAAGGTGGGTGAAGCATGAGTGAACCACCGCTGAGACAACAGATGG 29742 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||| ||| || | || || || || || ||||| ||||| || | ||||||| Sbjct 29743 TATGTTCCAACGACAGAGTCAATGTCATCTTTGTGGATTCCAACAGCTACTCTCATCAAC 29802 Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 77173 || || || || | || || ||| | | ||| || | || || | || | | Sbjct 29803 ATGTGTTGTGGCCTCTCCACTACCTTGCCACAAACTTTTAAGAGATACGACCTCTCAAGA 29862 Query 77174 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 |||||||| |||||||| | || |||||| | || ||||| || Sbjct 29863 GTTTTAAATCCAAAATAATCATAGTCAAAGTCCCGATCATAAATTAT 29909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712526735198400