Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ensete_20ventricosum_20[genbank_20GCA_5F000818735.2_202015-11-23] 45,745 sequences; 451,284,018 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq28260 163 9e-36 >seq28260 Length=3008 Score = 163 bits (180), Expect = 9e-36 Identities = 243/340 (71%), Gaps = 6/340 (2%) Strand=Plus/Minus Query 40067 GCGCGCCTTGATCCGACCGAAGGTCCCGATCTGTGCGACCTTGTCCGCCCCGTACTTCTC 40126 ||||||| || | |||||||| |||||| ||||||||||| || ||||| | | Sbjct 346 GCGCGCCAGGAACGAGCCGAAGGTAATGATCTGCGCGACCTTGTCGGCGCCGTAACGCGC 287 Query 40127 GGTGACGTACCTGATCACGTCGCCCCGTCG--CCGGTCATCGAAGTCGATGTCAACGTCG 40184 || || | ||| || ||| | || || || | || ||| ||||| || | || Sbjct 286 CCGCACATAGCGGATGACTTCGTCGCGCCGGTCCTGGCA--GAAATCGATATCGAAATCC 229 Query 40185 GGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGG 40244 ||||| ||||||||||| || || || || |||||||| | || ||| ||| || Sbjct 228 GGCATCGACACGCGCTCAGGATTGAGAAAGCGCTCGAACAGAAGACCGAAGCGGAGCGGA 169 Query 40245 TCCAGGTCTGTGAT-GCCGAGGCAGTAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCC 40303 || || || ||||| | | | ||| |||||||| ||||| |||||| | ||||| ||||| Sbjct 168 TCGAGATCGGTGATCGTCAAAGCA-TAGGCGACGAGCGAGCCGGCACCGGAGCCGCGTCC 110 Query 40304 GGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAA 40363 || |||||| | |||||||| |||||| | |||||| || | ||||| |||||| Sbjct 109 CGGCCCGACCGGTATGCCGTTCTTCTTGGCGAATTTGATGAAATCCGAGACGATCAGGAA 50 Query 40364 GTAGGACGGGAACCCCAGCTGGATGATCATGTCGATCTCG 40403 ||| ||| ||| || || |||||| | ||||| |||| Sbjct 49 ATAGCCCGGAAACTGCATCTTGATGATGACGTCGAGCTCG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160053808014360