Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq11126 248 7e-61 >seq11126 Length=1497 Score = 248 bits (274), Expect = 7e-61 Identities = 404/570 (71%), Gaps = 14/570 (2%) Strand=Plus/Minus Query 130327 ATGAAAATTGATTATGTTTCAGATCTCCATATAAATCATTGGATTCCTTGGAATGTAAAT 130386 |||||||||||||||| ||||||| | || || || ||||| | ||||| ||| Sbjct 962 ATGAAAATTGATTATGCTTCAGATTTACACGCCAACCACTGGATGCTTTGGACAAATAAT 903 Query 130387 CAGATTAAGTGGGAGAAGC-GAACAAGAGAAATTGTAAATAGGTTAATCTCAAACGGTAA 130445 || || |||||||| |||| ||||||||||| | || | | |||| ||| ||||| Sbjct 902 CAAATGAAGTGGGA-AAGCAGAACAAGAGAATTAACAAGAAAGCTAATAGAAAATGGTAA 844 Query 130446 TGGGGAGGTATTGGTCATTGCC-GGCGATTTTACTGAATGGAATCAACAAACTTTATGGG 130504 ||| || || || | ||| || || || |||| |||||||||||||||| | |||||| Sbjct 843 TGGAGAAGTTCTGAT-ATTACCTGGTGACTTTAGTGAATGGAATCAACAATCCTTATGGA 785 Query 130505 TTTTAGATGAGGCAGCAAAGCAATACGAGAAGGTTTACTTTACATATGGTAATCATGATC 130564 | |||||||| ||||||||||| || || | || || |||||| ||| || |||||| Sbjct 784 TATTAGATGAAGCAGCAAAGCATTATGAAAGAGTATATTTTACAGTTGGAAACCATGATA 725 Query 130565 TTTA-TTTACTT-AGCAAGAGCCAAAAAAGGAAATACTCAGACTCGTTAGGCAGGTTGAA 130622 | || ||| || || | |||||||| | ||| || ||| || |||| | | || Sbjct 724 TGTACCTTATTTCAGGA--AGCCAAAAGAAGAAGTATAAAGATTCTATAGGTCGAATTAA 667 Query 130623 TGATCTAATTCAAAAAGCTGCTGACATGAAAAATGTAACACCATTAATTAAGACAACTGA 130682 ||| || || |||| ||| |||| || |||||| || | |||| | || Sbjct 666 TGAACTGATAGAAAAGGCTTCTGAAATTCCTAATGTAGTTCCTCTTGTTAAAAATGTAGA 607 Query 130683 AACATACAAAGGAAAAGTCTTTGCAGGAGATGTAATGTGGTACCTTCCAAAAGGAATCGA 130742 ||||||||||| ||||| || ||||||||||| ||||||||||||| ||| | | Sbjct 606 TACATACAAAGGGAAAGTATTCGCAGGAGATGTGTTGTGGTACCTTCCTAAATCACAAGC 547 Query 130743 AGGATGGGACTTCTTTAAAGGAGTATCTAACGATTCTAATTACATTTGGCTTAATGGTTA 130802 | ||||| ||| || ||||| || ||||||| ||| || | | ||||| | Sbjct 546 TGATTGGGAGTTCCTTCGCAATGTATCCAATGATTCTAGTTATATATCAATCAATGG--A 489 Query 130803 TAACAAAGTAGATGGTGT---AAGAGCGATGTGGAAAGAATCAATGGATTGGTATGAAAC 130859 || |||| || ||| |||| | ||||| || |||||||||||||| || Sbjct 488 TATGCGGGTAG-TGATGTGCCAAGAAAACTACATAAAGAGTCTATGGATTGGTATGACAC 430 Query 130860 GCTTGAAAATACACAAGTTGATGTATTTGT 130889 | | ||| ||||||| |||||||||||||| Sbjct 429 GTTAGAAGATACACATGTTGATGTATTTGT 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933643320251